Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
NPIPA1Q9UND3 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA1Q9UND3 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.34□□□□□ -0.27
NPIPA1Q9UND3 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA1Q9UND3 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
NPIPA1Q9UND3 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
NPIPA1Q9UND3 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.33□□□□□ -0.27
NPIPA1Q9UND3 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
NPIPA1Q9UND3 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
NPIPA1Q9UND3 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.27
NPIPA1Q9UND3 AGGF1P1-201ENST00000509500 2073 ntBASIC13.33□□□□□ -0.27
NPIPA1Q9UND3 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
NPIPA1Q9UND3 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
NPIPA1Q9UND3 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 FXNP2-201ENST00000411625 547 ntBASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 ALG3P1-201ENST00000508806 1114 ntBASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 GCOM2-201ENST00000509133 1104 ntBASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 PRKXP1-201ENST00000561423 1122 ntBASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 MIR4706-201ENST00000582134 82 ntBASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 IRF3-215ENST00000596822 823 ntTSL 3 BASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 BX088702.1-201ENST00000610784 235 ntBASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 MRPL37P1-201ENST00000592451 1337 ntBASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NPIPA1Q9UND3 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA1Q9UND3 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA1Q9UND3 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
NPIPA1Q9UND3 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA1Q9UND3 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA1Q9UND3 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA1Q9UND3 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA1Q9UND3 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA1Q9UND3 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA1Q9UND3 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA1Q9UND3 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA1Q9UND3 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA1Q9UND3 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA1Q9UND3 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA1Q9UND3 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA1Q9UND3 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA1Q9UND3 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA1Q9UND3 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
NPIPA1Q9UND3 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA1Q9UND3 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC13.32□□□□□ -0.28
NPIPA1Q9UND3 PDIA3P2-201ENST00000428073 158 ntBASIC13.32□□□□□ -0.28
NPIPA1Q9UND3 AC116345.2-201ENST00000512837 523 ntBASIC13.32□□□□□ -0.28
NPIPA1Q9UND3 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.32□□□□□ -0.28
NPIPA1Q9UND3 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
NPIPA1Q9UND3 AC131206.1-201ENST00000538078 1211 ntBASIC13.32□□□□□ -0.28
NPIPA1Q9UND3 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.32□□□□□ -0.28
NPIPA1Q9UND3 AC103988.2-201ENST00000561804 725 ntBASIC13.32□□□□□ -0.28
NPIPA1Q9UND3 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.32□□□□□ -0.28
NPIPA1Q9UND3 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC13.32□□□□□ -0.28
NPIPA1Q9UND3 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC13.32□□□□□ -0.28
NPIPA1Q9UND3 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.32□□□□□ -0.28
NPIPA1Q9UND3 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
NPIPA1Q9UND3 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA1Q9UND3 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NPIPA1Q9UND3 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.32□□□□□ -0.28
NPIPA1Q9UND3 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms