Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 AC015802.1-201ENST00000588104 1449 ntBASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 CAP2P1-201ENST00000557743 1390 ntBASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 FRMPD2B-201ENST00000431305 1347 ntBASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 LBH-202ENST00000401506 485 ntTSL 3 BASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 HNRNPA1P27-201ENST00000412087 955 ntBASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 AC026320.2-201ENST00000434379 478 ntBASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 AC098935.1-201ENST00000446057 611 ntBASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 AC008723.1-201ENST00000506922 207 ntBASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 AP003419.4-201ENST00000616071 517 ntBASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 MIR6769A-201ENST00000617340 73 ntBASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 AC092299.1-201ENST00000632679 757 ntBASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 ST20-AS1-201ENST00000560255 4223 ntBASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 AL137784.3-201ENST00000623858 2288 ntBASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
HDAC6Q9UBN7 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HDAC6Q9UBN7 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC16.29■□□□□ 0.2
HDAC6Q9UBN7 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HDAC6Q9UBN7 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HDAC6Q9UBN7 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HDAC6Q9UBN7 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HDAC6Q9UBN7 FAM90A2P-201ENST00000511144 1395 ntBASIC16.29■□□□□ 0.2
HDAC6Q9UBN7 FAM90A25P-201ENST00000528404 1395 ntBASIC16.29■□□□□ 0.2
HDAC6Q9UBN7 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
HDAC6Q9UBN7 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HDAC6Q9UBN7 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HDAC6Q9UBN7 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HDAC6Q9UBN7 AC015909.3-201ENST00000572855 1794 ntBASIC16.29■□□□□ 0.2
HDAC6Q9UBN7 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HDAC6Q9UBN7 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
HDAC6Q9UBN7 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
HDAC6Q9UBN7 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC16.29■□□□□ 0.2
HDAC6Q9UBN7 RPL8P2-201ENST00000430538 502 ntBASIC16.29■□□□□ 0.2
HDAC6Q9UBN7 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC16.29■□□□□ 0.2
HDAC6Q9UBN7 RN7SL181P-201ENST00000462921 277 ntBASIC16.29■□□□□ 0.2
HDAC6Q9UBN7 AC104784.1-201ENST00000473096 294 ntBASIC16.29■□□□□ 0.2
HDAC6Q9UBN7 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC16.29■□□□□ 0.2
HDAC6Q9UBN7 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HDAC6Q9UBN7 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.29■□□□□ 0.2
HDAC6Q9UBN7 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC16.29■□□□□ 0.2
HDAC6Q9UBN7 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC16.29■□□□□ 0.2
HDAC6Q9UBN7 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HDAC6Q9UBN7 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC16.29■□□□□ 0.2
HDAC6Q9UBN7 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
HDAC6Q9UBN7 AC051619.9-201ENST00000623237 597 ntBASIC16.29■□□□□ 0.2
HDAC6Q9UBN7 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC16.29■□□□□ 0.2
HDAC6Q9UBN7 AL805961.1-201ENST00000642026 753 ntBASIC16.29■□□□□ 0.2
HDAC6Q9UBN7 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HDAC6Q9UBN7 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HDAC6Q9UBN7 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
HDAC6Q9UBN7 LINC01165-201ENST00000445190 1623 ntBASIC16.29■□□□□ 0.2
HDAC6Q9UBN7 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HDAC6Q9UBN7 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HDAC6Q9UBN7 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC16.29■□□□□ 0.2
HDAC6Q9UBN7 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HDAC6Q9UBN7 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.29■□□□□ 0.2
HDAC6Q9UBN7 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HDAC6Q9UBN7 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HDAC6Q9UBN7 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HDAC6Q9UBN7 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HDAC6Q9UBN7 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 AC018629.1-201ENST00000623381 1736 ntBASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HDAC6Q9UBN7 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms