Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM55Q9BYV6 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM55Q9BYV6 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM55Q9BYV6 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TRIM55Q9BYV6 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.66□□□□□ -0.06
TRIM55Q9BYV6 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
TRIM55Q9BYV6 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC14.66□□□□□ -0.06
TRIM55Q9BYV6 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC14.66□□□□□ -0.06
TRIM55Q9BYV6 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM55Q9BYV6 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.66□□□□□ -0.06
TRIM55Q9BYV6 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.66□□□□□ -0.06
TRIM55Q9BYV6 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM55Q9BYV6 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC14.66□□□□□ -0.06
TRIM55Q9BYV6 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM55Q9BYV6 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.66□□□□□ -0.06
TRIM55Q9BYV6 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM55Q9BYV6 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
TRIM55Q9BYV6 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
TRIM55Q9BYV6 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM55Q9BYV6 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC14.66□□□□□ -0.06
TRIM55Q9BYV6 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
TRIM55Q9BYV6 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TRIM55Q9BYV6 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
TRIM55Q9BYV6 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM55Q9BYV6 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC14.66□□□□□ -0.06
TRIM55Q9BYV6 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM55Q9BYV6 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM55Q9BYV6 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM55Q9BYV6 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 AC245100.3-201ENST00000441281 285 ntBASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 AC124283.3-201ENST00000570869 594 ntBASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 AL158070.2-201ENST00000623713 1621 ntBASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 AGAP10P-201ENST00000454844 2418 ntBASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 KRT8P35-201ENST00000483942 1338 ntBASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 INTS4P2-202ENST00000614726 2019 ntBASIC14.65□□□□□ -0.06
TRIM55Q9BYV6 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRIM55Q9BYV6 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRIM55Q9BYV6 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC14.64□□□□□ -0.07
TRIM55Q9BYV6 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRIM55Q9BYV6 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
TRIM55Q9BYV6 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
TRIM55Q9BYV6 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC14.64□□□□□ -0.07
TRIM55Q9BYV6 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRIM55Q9BYV6 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC14.64□□□□□ -0.07
TRIM55Q9BYV6 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
TRIM55Q9BYV6 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC14.64□□□□□ -0.07
TRIM55Q9BYV6 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRIM55Q9BYV6 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRIM55Q9BYV6 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRIM55Q9BYV6 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
TRIM55Q9BYV6 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRIM55Q9BYV6 AC072061.1-201ENST00000569710 2234 ntBASIC14.64□□□□□ -0.07
TRIM55Q9BYV6 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRIM55Q9BYV6 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms