Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC11.74□□□□□ -0.53
RAB40CQ96S21 VMA21-202ENST00000370361 693 ntTSL 5 BASIC11.74□□□□□ -0.53
RAB40CQ96S21 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RAB40CQ96S21 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB40CQ96S21 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC11.74□□□□□ -0.53
RAB40CQ96S21 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC11.74□□□□□ -0.53
RAB40CQ96S21 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC11.74□□□□□ -0.53
RAB40CQ96S21 PMS2P2-201ENST00000425039 1128 ntBASIC11.74□□□□□ -0.53
RAB40CQ96S21 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB40CQ96S21 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC11.74□□□□□ -0.53
RAB40CQ96S21 AC055876.3-201ENST00000431496 288 ntBASIC11.74□□□□□ -0.53
RAB40CQ96S21 AC241585.1-201ENST00000433527 519 ntBASIC11.74□□□□□ -0.53
RAB40CQ96S21 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC11.74□□□□□ -0.53
RAB40CQ96S21 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC11.74□□□□□ -0.53
RAB40CQ96S21 AP001582.1-201ENST00000525856 295 ntBASIC11.74□□□□□ -0.53
RAB40CQ96S21 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC11.74□□□□□ -0.53
RAB40CQ96S21 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RAB40CQ96S21 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC11.74□□□□□ -0.53
RAB40CQ96S21 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC11.74□□□□□ -0.53
RAB40CQ96S21 SPDYE22P-201ENST00000582158 798 ntBASIC11.74□□□□□ -0.53
RAB40CQ96S21 AC104506.1-201ENST00000609247 429 ntBASIC11.74□□□□□ -0.53
RAB40CQ96S21 AC138649.4-201ENST00000612222 287 ntBASIC11.74□□□□□ -0.53
RAB40CQ96S21 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC11.74□□□□□ -0.53
RAB40CQ96S21 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB40CQ96S21 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RAB40CQ96S21 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB40CQ96S21 AC100757.3-201ENST00000622361 1406 ntBASIC11.74□□□□□ -0.53
RAB40CQ96S21 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB40CQ96S21 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
RAB40CQ96S21 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
RAB40CQ96S21 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB40CQ96S21 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC11.74□□□□□ -0.53
RAB40CQ96S21 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC11.74□□□□□ -0.53
RAB40CQ96S21 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB40CQ96S21 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB40CQ96S21 AL355102.3-201ENST00000554299 1678 ntBASIC11.74□□□□□ -0.53
RAB40CQ96S21 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB40CQ96S21 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB40CQ96S21 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
RAB40CQ96S21 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
RAB40CQ96S21 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC11.74□□□□□ -0.53
RAB40CQ96S21 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
RAB40CQ96S21 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB40CQ96S21 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB40CQ96S21 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
RAB40CQ96S21 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB40CQ96S21 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC11.73□□□□□ -0.53
RAB40CQ96S21 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
RAB40CQ96S21 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB40CQ96S21 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB40CQ96S21 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB40CQ96S21 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB40CQ96S21 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB40CQ96S21 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB40CQ96S21 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
RAB40CQ96S21 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB40CQ96S21 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RAB40CQ96S21 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RAB40CQ96S21 RN7SKP230-201ENST00000365642 335 ntBASIC11.73□□□□□ -0.53
RAB40CQ96S21 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB40CQ96S21 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB40CQ96S21 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC11.73□□□□□ -0.53
RAB40CQ96S21 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB40CQ96S21 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB40CQ96S21 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
RAB40CQ96S21 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
RAB40CQ96S21 APOA1-205ENST00000375329 927 ntTSL 2 BASIC11.73□□□□□ -0.53
RAB40CQ96S21 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB40CQ96S21 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC11.73□□□□□ -0.53
RAB40CQ96S21 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB40CQ96S21 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC11.73□□□□□ -0.53
RAB40CQ96S21 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC11.73□□□□□ -0.53
RAB40CQ96S21 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC11.73□□□□□ -0.53
RAB40CQ96S21 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC11.73□□□□□ -0.53
RAB40CQ96S21 ARSEP1-201ENST00000420443 635 ntBASIC11.73□□□□□ -0.53
RAB40CQ96S21 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB40CQ96S21 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC11.73□□□□□ -0.53
RAB40CQ96S21 AL161932.2-201ENST00000435436 679 ntBASIC11.73□□□□□ -0.53
RAB40CQ96S21 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
RAB40CQ96S21 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC11.73□□□□□ -0.53
RAB40CQ96S21 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RAB40CQ96S21 AL512638.1-201ENST00000457493 794 ntBASIC11.73□□□□□ -0.53
RAB40CQ96S21 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC11.73□□□□□ -0.53
RAB40CQ96S21 AL359845.1-201ENST00000458202 1648 ntBASIC11.73□□□□□ -0.53
RAB40CQ96S21 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC11.73□□□□□ -0.53
RAB40CQ96S21 ALG3P1-201ENST00000508806 1114 ntBASIC11.73□□□□□ -0.53
RAB40CQ96S21 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC11.73□□□□□ -0.53
RAB40CQ96S21 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC11.73□□□□□ -0.53
RAB40CQ96S21 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC11.73□□□□□ -0.53
RAB40CQ96S21 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC11.73□□□□□ -0.53
RAB40CQ96S21 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
RAB40CQ96S21 AC120045.2-201ENST00000567334 178 ntBASIC11.73□□□□□ -0.53
RAB40CQ96S21 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB40CQ96S21 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC11.73□□□□□ -0.53
RAB40CQ96S21 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC11.73□□□□□ -0.53
RAB40CQ96S21 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RAB40CQ96S21 SRD5A3P1-201ENST00000603021 949 ntBASIC11.73□□□□□ -0.53
RAB40CQ96S21 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
RAB40CQ96S21 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RAB40CQ96S21 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC11.73□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 145.4 ms