Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 PTP4A1P2-201ENST00000546033 454 ntBASIC12.63□□□□□ -0.39
CPNE2Q96FN4 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 AC138466.3-201ENST00000619983 221 ntBASIC12.63□□□□□ -0.39
CPNE2Q96FN4 AP001002.3-201ENST00000623482 206 ntBASIC12.63□□□□□ -0.39
CPNE2Q96FN4 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CPNE2Q96FN4 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CPNE2Q96FN4 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC12.62□□□□□ -0.39
CPNE2Q96FN4 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.62□□□□□ -0.39
CPNE2Q96FN4 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CPNE2Q96FN4 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.62□□□□□ -0.39
CPNE2Q96FN4 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CPNE2Q96FN4 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CPNE2Q96FN4 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CPNE2Q96FN4 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CPNE2Q96FN4 SNX33-201ENST00000308527 8008 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CPNE2Q96FN4 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
CPNE2Q96FN4 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CPNE2Q96FN4 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CPNE2Q96FN4 AC083964.2-201ENST00000623988 2396 ntBASIC12.62□□□□□ -0.39
CPNE2Q96FN4 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
CPNE2Q96FN4 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.62□□□□□ -0.39
CPNE2Q96FN4 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CPNE2Q96FN4 RN7SKP230-201ENST00000365642 335 ntBASIC12.62□□□□□ -0.39
CPNE2Q96FN4 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CPNE2Q96FN4 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CPNE2Q96FN4 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CPNE2Q96FN4 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC12.62□□□□□ -0.39
CPNE2Q96FN4 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.62□□□□□ -0.39
CPNE2Q96FN4 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC12.62□□□□□ -0.39
CPNE2Q96FN4 AC140912.1-201ENST00000577171 1054 ntBASIC12.62□□□□□ -0.39
CPNE2Q96FN4 CLUHP6-201ENST00000580789 941 ntBASIC12.62□□□□□ -0.39
CPNE2Q96FN4 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CPNE2Q96FN4 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CPNE2Q96FN4 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CPNE2Q96FN4 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC12.62□□□□□ -0.39
CPNE2Q96FN4 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CPNE2Q96FN4 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.62□□□□□ -0.39
CPNE2Q96FN4 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CPNE2Q96FN4 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CPNE2Q96FN4 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CPNE2Q96FN4 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CPNE2Q96FN4 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.62□□□□□ -0.39
CPNE2Q96FN4 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CPNE2Q96FN4 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CPNE2Q96FN4 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CPNE2Q96FN4 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.62□□□□□ -0.39
CPNE2Q96FN4 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CPNE2Q96FN4 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CPNE2Q96FN4 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CPNE2Q96FN4 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.62□□□□□ -0.39
CPNE2Q96FN4 AC009093.10-201ENST00000641956 1442 ntBASIC12.62□□□□□ -0.39
CPNE2Q96FN4 CLUHP2-201ENST00000426660 1303 ntBASIC12.62□□□□□ -0.39
CPNE2Q96FN4 FKBP4P6-201ENST00000457486 1332 ntBASIC12.62□□□□□ -0.39
CPNE2Q96FN4 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC12.62□□□□□ -0.39
CPNE2Q96FN4 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.62□□□□□ -0.39
CPNE2Q96FN4 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CPNE2Q96FN4 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC12.62□□□□□ -0.39
CPNE2Q96FN4 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CPNE2Q96FN4 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CPNE2Q96FN4 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC12.61□□□□□ -0.39
CPNE2Q96FN4 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CPNE2Q96FN4 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CPNE2Q96FN4 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
CPNE2Q96FN4 AL590440.2-201ENST00000641973 1595 ntBASIC12.61□□□□□ -0.39
CPNE2Q96FN4 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CPNE2Q96FN4 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CPNE2Q96FN4 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.61□□□□□ -0.39
CPNE2Q96FN4 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
CPNE2Q96FN4 MEX3B-202ENST00000558133 4333 ntBASIC12.61□□□□□ -0.39
CPNE2Q96FN4 TDG-209ENST00000544861 1387 ntTSL 2 BASIC12.61□□□□□ -0.39
CPNE2Q96FN4 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
CPNE2Q96FN4 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CPNE2Q96FN4 TPM3P8-201ENST00000330554 643 ntBASIC12.61□□□□□ -0.39
CPNE2Q96FN4 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
CPNE2Q96FN4 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CPNE2Q96FN4 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CPNE2Q96FN4 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC12.61□□□□□ -0.39
CPNE2Q96FN4 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.61□□□□□ -0.39
CPNE2Q96FN4 AL035414.1-201ENST00000451327 857 ntBASIC12.61□□□□□ -0.39
CPNE2Q96FN4 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.61□□□□□ -0.39
CPNE2Q96FN4 AC093433.1-201ENST00000458048 571 ntBASIC12.61□□□□□ -0.39
CPNE2Q96FN4 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC12.61□□□□□ -0.39
CPNE2Q96FN4 AC027237.1-201ENST00000560942 655 ntBASIC12.61□□□□□ -0.39
CPNE2Q96FN4 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC12.61□□□□□ -0.39
CPNE2Q96FN4 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CPNE2Q96FN4 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.61□□□□□ -0.39
CPNE2Q96FN4 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms