Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM54Q969K7 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC12.64□□□□□ -0.39
TMEM54Q969K7 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM54Q969K7 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM54Q969K7 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
TMEM54Q969K7 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM54Q969K7 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
TMEM54Q969K7 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM54Q969K7 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
TMEM54Q969K7 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM54Q969K7 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC12.63□□□□□ -0.39
TMEM54Q969K7 LINC01815-202ENST00000641468 1409 ntBASIC12.63□□□□□ -0.39
TMEM54Q969K7 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.63□□□□□ -0.39
TMEM54Q969K7 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM54Q969K7 KCP-203ENST00000610776 5108 ntTSL 5 BASIC12.63□□□□□ -0.39
TMEM54Q969K7 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.63□□□□□ -0.39
TMEM54Q969K7 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM54Q969K7 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.63□□□□□ -0.39
TMEM54Q969K7 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
TMEM54Q969K7 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
TMEM54Q969K7 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC12.63□□□□□ -0.39
TMEM54Q969K7 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC12.63□□□□□ -0.39
TMEM54Q969K7 AC005840.4-201ENST00000541242 2494 ntBASIC12.63□□□□□ -0.39
TMEM54Q969K7 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM54Q969K7 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC12.63□□□□□ -0.39
TMEM54Q969K7 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM54Q969K7 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM54Q969K7 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC12.63□□□□□ -0.39
TMEM54Q969K7 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM54Q969K7 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM54Q969K7 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM54Q969K7 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM54Q969K7 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM54Q969K7 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM54Q969K7 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
TMEM54Q969K7 FAM86MP-201ENST00000340703 885 ntBASIC12.63□□□□□ -0.39
TMEM54Q969K7 RN7SKP214-201ENST00000364208 315 ntBASIC12.63□□□□□ -0.39
TMEM54Q969K7 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM54Q969K7 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC12.63□□□□□ -0.39
TMEM54Q969K7 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM54Q969K7 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC12.63□□□□□ -0.39
TMEM54Q969K7 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC12.63□□□□□ -0.39
TMEM54Q969K7 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC12.63□□□□□ -0.39
TMEM54Q969K7 OARD1-204ENST00000464633 717 ntTSL 2 BASIC12.63□□□□□ -0.39
TMEM54Q969K7 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC12.63□□□□□ -0.39
TMEM54Q969K7 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM54Q969K7 KRT18P8-201ENST00000581937 1246 ntBASIC12.63□□□□□ -0.39
TMEM54Q969K7 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC12.63□□□□□ -0.39
TMEM54Q969K7 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC12.63□□□□□ -0.39
TMEM54Q969K7 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
TMEM54Q969K7 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM54Q969K7 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
TMEM54Q969K7 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM54Q969K7 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC12.63□□□□□ -0.39
TMEM54Q969K7 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM54Q969K7 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM54Q969K7 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
TMEM54Q969K7 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
TMEM54Q969K7 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM54Q969K7 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM54Q969K7 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
TMEM54Q969K7 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC12.63□□□□□ -0.39
TMEM54Q969K7 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM54Q969K7 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC12.63□□□□□ -0.39
TMEM54Q969K7 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM54Q969K7 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
TMEM54Q969K7 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC12.63□□□□□ -0.39
TMEM54Q969K7 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
TMEM54Q969K7 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM54Q969K7 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM54Q969K7 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM54Q969K7 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM54Q969K7 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM54Q969K7 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.62□□□□□ -0.39
TMEM54Q969K7 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.62□□□□□ -0.39
TMEM54Q969K7 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM54Q969K7 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
TMEM54Q969K7 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC12.62□□□□□ -0.39
TMEM54Q969K7 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM54Q969K7 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.62□□□□□ -0.39
TMEM54Q969K7 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.62□□□□□ -0.39
TMEM54Q969K7 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM54Q969K7 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM54Q969K7 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM54Q969K7 AC111170.3-201ENST00000624282 2464 ntBASIC12.62□□□□□ -0.39
TMEM54Q969K7 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM54Q969K7 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC12.62□□□□□ -0.39
TMEM54Q969K7 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM54Q969K7 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM54Q969K7 KRT8P21-201ENST00000430398 1491 ntBASIC12.62□□□□□ -0.39
TMEM54Q969K7 RPL13AP3-202ENST00000494676 1473 ntBASIC12.62□□□□□ -0.39
TMEM54Q969K7 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.62□□□□□ -0.39
TMEM54Q969K7 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM54Q969K7 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM54Q969K7 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM54Q969K7 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM54Q969K7 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM54Q969K7 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
TMEM54Q969K7 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC12.62□□□□□ -0.39
TMEM54Q969K7 AC011742.3-201ENST00000439053 820 ntBASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms