Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
CHD5Q8TDI0 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
CHD5Q8TDI0 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
CHD5Q8TDI0 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.11
CHD5Q8TDI0 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
CHD5Q8TDI0 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
CHD5Q8TDI0 GOLGA8UP-201ENST00000527159 1755 ntBASIC14.33□□□□□ -0.11
CHD5Q8TDI0 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CHD5Q8TDI0 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CHD5Q8TDI0 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHD5Q8TDI0 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CHD5Q8TDI0 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHD5Q8TDI0 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHD5Q8TDI0 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC14.33□□□□□ -0.12
CHD5Q8TDI0 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC14.33□□□□□ -0.12
CHD5Q8TDI0 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHD5Q8TDI0 MAGEA5-201ENST00000446757 942 ntBASIC14.33□□□□□ -0.12
CHD5Q8TDI0 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC14.33□□□□□ -0.12
CHD5Q8TDI0 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC14.33□□□□□ -0.12
CHD5Q8TDI0 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHD5Q8TDI0 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC14.33□□□□□ -0.12
CHD5Q8TDI0 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC14.33□□□□□ -0.12
CHD5Q8TDI0 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CHD5Q8TDI0 TEKT4P2-202ENST00000559466 1312 ntBASIC14.33□□□□□ -0.12
CHD5Q8TDI0 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC14.33□□□□□ -0.12
CHD5Q8TDI0 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHD5Q8TDI0 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHD5Q8TDI0 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHD5Q8TDI0 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHD5Q8TDI0 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHD5Q8TDI0 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHD5Q8TDI0 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC14.33□□□□□ -0.12
CHD5Q8TDI0 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHD5Q8TDI0 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CHD5Q8TDI0 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CHD5Q8TDI0 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
CHD5Q8TDI0 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHD5Q8TDI0 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHD5Q8TDI0 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CHD5Q8TDI0 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHD5Q8TDI0 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHD5Q8TDI0 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
CHD5Q8TDI0 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CHD5Q8TDI0 PYY2-201ENST00000315776 282 ntBASIC14.33□□□□□ -0.12
CHD5Q8TDI0 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC14.33□□□□□ -0.12
CHD5Q8TDI0 HLA-DPB2-205ENST00000435074 1188 ntBASIC14.33□□□□□ -0.12
CHD5Q8TDI0 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC14.33□□□□□ -0.12
CHD5Q8TDI0 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CHD5Q8TDI0 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
CHD5Q8TDI0 FOS-204ENST00000554617 796 ntTSL 2 BASIC14.33□□□□□ -0.12
CHD5Q8TDI0 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC14.33□□□□□ -0.12
CHD5Q8TDI0 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC14.33□□□□□ -0.12
CHD5Q8TDI0 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CHD5Q8TDI0 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CHD5Q8TDI0 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHD5Q8TDI0 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
CHD5Q8TDI0 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHD5Q8TDI0 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHD5Q8TDI0 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CHD5Q8TDI0 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHD5Q8TDI0 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.32□□□□□ -0.12
CHD5Q8TDI0 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHD5Q8TDI0 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHD5Q8TDI0 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHD5Q8TDI0 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHD5Q8TDI0 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CHD5Q8TDI0 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CHD5Q8TDI0 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CHD5Q8TDI0 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHD5Q8TDI0 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHD5Q8TDI0 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CHD5Q8TDI0 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHD5Q8TDI0 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHD5Q8TDI0 NCLP1-201ENST00000445357 1963 ntBASIC14.32□□□□□ -0.12
CHD5Q8TDI0 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CHD5Q8TDI0 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CHD5Q8TDI0 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHD5Q8TDI0 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHD5Q8TDI0 AP000356.3-201ENST00000382243 753 ntBASIC14.32□□□□□ -0.12
CHD5Q8TDI0 BAX-205ENST00000391871 687 ntTSL 5 BASIC14.32□□□□□ -0.12
CHD5Q8TDI0 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC14.32□□□□□ -0.12
CHD5Q8TDI0 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC14.32□□□□□ -0.12
CHD5Q8TDI0 TPM1-223ENST00000560445 485 ntTSL 3 BASIC14.32□□□□□ -0.12
CHD5Q8TDI0 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
CHD5Q8TDI0 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHD5Q8TDI0 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHD5Q8TDI0 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC14.32□□□□□ -0.12
CHD5Q8TDI0 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.32□□□□□ -0.12
CHD5Q8TDI0 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CHD5Q8TDI0 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CHD5Q8TDI0 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CHD5Q8TDI0 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms