Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
NUP43Q8NFH3 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.5□□□□□ -0.25
NUP43Q8NFH3 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 MBLAC2-202ENST00000514906 1936 ntBASIC13.49□□□□□ -0.25
NUP43Q8NFH3 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 AC111170.3-201ENST00000624282 2464 ntBASIC13.49□□□□□ -0.25
NUP43Q8NFH3 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 MTX1P1-201ENST00000440904 838 ntBASIC13.49□□□□□ -0.25
NUP43Q8NFH3 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 AL160314.3-201ENST00000556041 767 ntBASIC13.49□□□□□ -0.25
NUP43Q8NFH3 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 AC133540.1-201ENST00000620845 1019 ntBASIC13.49□□□□□ -0.25
NUP43Q8NFH3 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
NUP43Q8NFH3 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
NUP43Q8NFH3 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NUP43Q8NFH3 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NUP43Q8NFH3 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
NUP43Q8NFH3 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NUP43Q8NFH3 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NUP43Q8NFH3 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
NUP43Q8NFH3 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.48□□□□□ -0.25
NUP43Q8NFH3 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NUP43Q8NFH3 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.48□□□□□ -0.25
NUP43Q8NFH3 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
NUP43Q8NFH3 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NUP43Q8NFH3 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NUP43Q8NFH3 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NUP43Q8NFH3 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NUP43Q8NFH3 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NUP43Q8NFH3 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.48□□□□□ -0.25
NUP43Q8NFH3 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.48□□□□□ -0.25
NUP43Q8NFH3 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NUP43Q8NFH3 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.48□□□□□ -0.25
NUP43Q8NFH3 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NUP43Q8NFH3 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NUP43Q8NFH3 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NUP43Q8NFH3 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NUP43Q8NFH3 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.48□□□□□ -0.25
NUP43Q8NFH3 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.48□□□□□ -0.25
NUP43Q8NFH3 HSPB1P2-201ENST00000448722 546 ntBASIC13.48□□□□□ -0.25
NUP43Q8NFH3 Z93015.1-201ENST00000451718 390 ntBASIC13.48□□□□□ -0.25
NUP43Q8NFH3 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NUP43Q8NFH3 AC006122.1-201ENST00000493323 440 ntBASIC13.48□□□□□ -0.25
NUP43Q8NFH3 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.48□□□□□ -0.25
NUP43Q8NFH3 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
NUP43Q8NFH3 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.48□□□□□ -0.25
NUP43Q8NFH3 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NUP43Q8NFH3 RNA5SP412-201ENST00000516234 123 ntBASIC13.48□□□□□ -0.25
NUP43Q8NFH3 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.48□□□□□ -0.25
NUP43Q8NFH3 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.48□□□□□ -0.25
NUP43Q8NFH3 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.48□□□□□ -0.25
NUP43Q8NFH3 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.48□□□□□ -0.25
NUP43Q8NFH3 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.48□□□□□ -0.25
NUP43Q8NFH3 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
NUP43Q8NFH3 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NUP43Q8NFH3 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NUP43Q8NFH3 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms