Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 AC091271.1-201ENST00000611877 1162 ntBASIC13.79□□□□□ -0.2
SRFBP1Q8NEF9 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SRFBP1Q8NEF9 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
SRFBP1Q8NEF9 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.79□□□□□ -0.2
SRFBP1Q8NEF9 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
SRFBP1Q8NEF9 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRFBP1Q8NEF9 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRFBP1Q8NEF9 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.79□□□□□ -0.2
SRFBP1Q8NEF9 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SRFBP1Q8NEF9 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SRFBP1Q8NEF9 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRFBP1Q8NEF9 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
SRFBP1Q8NEF9 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRFBP1Q8NEF9 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRFBP1Q8NEF9 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SRFBP1Q8NEF9 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRFBP1Q8NEF9 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRFBP1Q8NEF9 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRFBP1Q8NEF9 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SRFBP1Q8NEF9 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRFBP1Q8NEF9 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SRFBP1Q8NEF9 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 AC090386.2-201ENST00000623010 1039 ntBASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 AL359881.3-201ENST00000602640 1721 ntBASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SRFBP1Q8NEF9 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SRFBP1Q8NEF9 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
SRFBP1Q8NEF9 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
SRFBP1Q8NEF9 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SRFBP1Q8NEF9 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.77□□□□□ -0.2
SRFBP1Q8NEF9 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SRFBP1Q8NEF9 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SRFBP1Q8NEF9 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SRFBP1Q8NEF9 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SRFBP1Q8NEF9 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.77□□□□□ -0.21
SRFBP1Q8NEF9 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SRFBP1Q8NEF9 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SRFBP1Q8NEF9 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SRFBP1Q8NEF9 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.77□□□□□ -0.21
SRFBP1Q8NEF9 SMS-201ENST00000379404 1174 ntTSL 3 BASIC13.77□□□□□ -0.21
SRFBP1Q8NEF9 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.77□□□□□ -0.21
SRFBP1Q8NEF9 AC004899.1-201ENST00000424687 1714 ntBASIC13.77□□□□□ -0.21
SRFBP1Q8NEF9 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SRFBP1Q8NEF9 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SRFBP1Q8NEF9 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SRFBP1Q8NEF9 RNMTL1P1-201ENST00000454103 560 ntBASIC13.77□□□□□ -0.21
SRFBP1Q8NEF9 RPL18P13-201ENST00000478088 569 ntBASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms