Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 RN7SL371P-201ENST00000578099 267 ntBASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 SIGLEC18P-201ENST00000602271 909 ntBASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 BAP1-211ENST00000615113 489 ntBASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 AC007718.1-201ENST00000621078 280 ntBASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 AC015967.2-201ENST00000624092 234 ntBASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 AC006435.4-201ENST00000625037 234 ntBASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 AL356737.1-201ENST00000634391 234 ntBASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ARHGEF39Q8N4T4 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ARHGEF39Q8N4T4 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ARHGEF39Q8N4T4 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ARHGEF39Q8N4T4 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.49□□□□□ -0.25
ARHGEF39Q8N4T4 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.49□□□□□ -0.25
ARHGEF39Q8N4T4 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC13.49□□□□□ -0.25
ARHGEF39Q8N4T4 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ARHGEF39Q8N4T4 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.49□□□□□ -0.25
ARHGEF39Q8N4T4 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ARHGEF39Q8N4T4 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ARHGEF39Q8N4T4 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
ARHGEF39Q8N4T4 CAP2P1-201ENST00000557743 1390 ntBASIC13.49□□□□□ -0.25
ARHGEF39Q8N4T4 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
ARHGEF39Q8N4T4 KRT18P9-201ENST00000604826 1300 ntBASIC13.49□□□□□ -0.25
ARHGEF39Q8N4T4 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ARHGEF39Q8N4T4 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
ARHGEF39Q8N4T4 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ARHGEF39Q8N4T4 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ARHGEF39Q8N4T4 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC13.49□□□□□ -0.25
ARHGEF39Q8N4T4 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
ARHGEF39Q8N4T4 HLA-DQB2-229ENST00000411527 1059 ntBASIC13.49□□□□□ -0.25
ARHGEF39Q8N4T4 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
ARHGEF39Q8N4T4 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ARHGEF39Q8N4T4 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC13.49□□□□□ -0.25
ARHGEF39Q8N4T4 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC13.49□□□□□ -0.25
ARHGEF39Q8N4T4 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC13.49□□□□□ -0.25
ARHGEF39Q8N4T4 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC13.49□□□□□ -0.25
ARHGEF39Q8N4T4 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.49□□□□□ -0.25
ARHGEF39Q8N4T4 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.49□□□□□ -0.25
ARHGEF39Q8N4T4 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC13.49□□□□□ -0.25
ARHGEF39Q8N4T4 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
ARHGEF39Q8N4T4 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ARHGEF39Q8N4T4 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
ARHGEF39Q8N4T4 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ARHGEF39Q8N4T4 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ARHGEF39Q8N4T4 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ARHGEF39Q8N4T4 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.49□□□□□ -0.25
ARHGEF39Q8N4T4 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 MIR645-201ENST00000385283 94 ntBASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC13.48□□□□□ -0.25
ARHGEF39Q8N4T4 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms