Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 STX3-207ENST00000633708 3111 ntTSL 5 BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 PLIN3-201ENST00000221957 2333 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 AC004832.2-201ENST00000426397 482 ntBASIC13.59□□□□□ -0.23
LPCAT4Q643R3 FAM58DP-201ENST00000428076 619 ntBASIC13.59□□□□□ -0.23
LPCAT4Q643R3 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 AK2P2-201ENST00000439142 405 ntBASIC13.59□□□□□ -0.23
LPCAT4Q643R3 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 PIN1-206ENST00000587625 878 ntTSL 2 BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 CAND2-206ENST00000626378 333 ntTSL 5 BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 AL109936.8-201ENST00000641772 604 ntBASIC13.59□□□□□ -0.23
LPCAT4Q643R3 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 ACTN1-202ENST00000376839 2824 ntTSL 2 BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 SLC48A1-201ENST00000442218 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 PIGS-202ENST00000308360 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 MYO1D-206ENST00000579584 3500 ntTSL 2 BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.59□□□□□ -0.23
LPCAT4Q643R3 AC108024.1-201ENST00000626286 1721 ntBASIC13.59□□□□□ -0.23
LPCAT4Q643R3 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LPCAT4Q643R3 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
LPCAT4Q643R3 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
LPCAT4Q643R3 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.58□□□□□ -0.23
LPCAT4Q643R3 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
LPCAT4Q643R3 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
LPCAT4Q643R3 MARCH10-201ENST00000311269 3090 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.23
LPCAT4Q643R3 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
LPCAT4Q643R3 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LPCAT4Q643R3 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC13.58□□□□□ -0.24
LPCAT4Q643R3 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LPCAT4Q643R3 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LPCAT4Q643R3 DRD5P1-201ENST00000456605 1438 ntBASIC13.58□□□□□ -0.24
LPCAT4Q643R3 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LPCAT4Q643R3 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LPCAT4Q643R3 FAM102A-202ENST00000373084 3352 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LPCAT4Q643R3 CHRNA7-223ENST00000637033 3204 ntTSL 5 BASIC13.58□□□□□ -0.24
LPCAT4Q643R3 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LPCAT4Q643R3 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
LPCAT4Q643R3 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LPCAT4Q643R3 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.58□□□□□ -0.24
LPCAT4Q643R3 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.58□□□□□ -0.24
LPCAT4Q643R3 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.58□□□□□ -0.24
LPCAT4Q643R3 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
LPCAT4Q643R3 AL121894.2-201ENST00000602977 491 ntBASIC13.58□□□□□ -0.24
LPCAT4Q643R3 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.58□□□□□ -0.24
LPCAT4Q643R3 FAM197Y3-203ENST00000618346 717 ntBASIC13.58□□□□□ -0.24
LPCAT4Q643R3 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
LPCAT4Q643R3 AP001002.3-201ENST00000623482 206 ntBASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms