Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 SLC36A1-211ENST00000616007 1389 ntTSL 2 BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 LAP3P2-201ENST00000454686 1454 ntBASIC13.69□□□□□ -0.22
RIF1Q5UIP0 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 AL592146.2-201ENST00000565388 444 ntTSL 5 BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 PDLIM1P1-201ENST00000604187 969 ntBASIC13.69□□□□□ -0.22
RIF1Q5UIP0 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RIF1Q5UIP0 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 TRBV11-2-201ENST00000471935 408 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 PSME3-213ENST00000592169 826 ntTSL 3 BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 AC123912.6-201ENST00000612657 315 ntBASIC13.68□□□□□ -0.22
RIF1Q5UIP0 BX510359.7-201ENST00000619819 630 ntBASIC13.68□□□□□ -0.22
RIF1Q5UIP0 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 NKILA-202ENST00000614771 2598 ntBASIC13.68□□□□□ -0.22
RIF1Q5UIP0 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 RNF4-216ENST00000511859 1373 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 SARS-202ENST00000369923 1882 ntTSL 5 BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 ZNF684-201ENST00000372696 1009 ntTSL 3 BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 MIR632-201ENST00000385193 94 ntBASIC13.68□□□□□ -0.22
RIF1Q5UIP0 NANOS3-202ENST00000397555 769 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 GHRL-206ENST00000430179 856 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 VDAC1P11-201ENST00000458323 852 ntBASIC13.68□□□□□ -0.22
RIF1Q5UIP0 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 AC103724.2-201ENST00000520355 476 ntBASIC13.68□□□□□ -0.22
RIF1Q5UIP0 AC025419.1-201ENST00000537250 690 ntTSL 3 BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 AC010202.1-201ENST00000551181 405 ntBASIC13.68□□□□□ -0.22
RIF1Q5UIP0 RN7SL455P-201ENST00000580629 282 ntBASIC13.68□□□□□ -0.22
RIF1Q5UIP0 MED25-209ENST00000612791 881 ntTSL 5 BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 TUBA3GP-201ENST00000410028 1325 ntBASIC13.68□□□□□ -0.22
RIF1Q5UIP0 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 AC012158.1-201ENST00000535684 1366 ntTSL 2 BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.68□□□□□ -0.22
RIF1Q5UIP0 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RIF1Q5UIP0 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RIF1Q5UIP0 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms