Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CERKLQ49MI3 MPI-203ENST00000535694 1523 ntTSL 2 BASIC16.71■□□□□ 0.27
CERKLQ49MI3 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CERKLQ49MI3 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CERKLQ49MI3 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CERKLQ49MI3 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CERKLQ49MI3 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CERKLQ49MI3 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CERKLQ49MI3 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC16.71■□□□□ 0.27
CERKLQ49MI3 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
CERKLQ49MI3 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC16.71■□□□□ 0.27
CERKLQ49MI3 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CERKLQ49MI3 CTBP2P4-201ENST00000513884 920 ntBASIC16.71■□□□□ 0.27
CERKLQ49MI3 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC16.71■□□□□ 0.27
CERKLQ49MI3 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CERKLQ49MI3 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC16.71■□□□□ 0.27
CERKLQ49MI3 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CERKLQ49MI3 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CERKLQ49MI3 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CERKLQ49MI3 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC16.71■□□□□ 0.27
CERKLQ49MI3 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CERKLQ49MI3 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
CERKLQ49MI3 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CERKLQ49MI3 RPL13AP3-202ENST00000494676 1473 ntBASIC16.71■□□□□ 0.27
CERKLQ49MI3 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.71■□□□□ 0.27
CERKLQ49MI3 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CERKLQ49MI3 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CERKLQ49MI3 IL9RP3-201ENST00000442856 1674 ntBASIC16.71■□□□□ 0.27
CERKLQ49MI3 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CERKLQ49MI3 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CERKLQ49MI3 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CERKLQ49MI3 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CERKLQ49MI3 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CERKLQ49MI3 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CERKLQ49MI3 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
CERKLQ49MI3 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC16.7■□□□□ 0.26
CERKLQ49MI3 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CERKLQ49MI3 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CERKLQ49MI3 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CERKLQ49MI3 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
CERKLQ49MI3 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.7■□□□□ 0.26
CERKLQ49MI3 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CERKLQ49MI3 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
CERKLQ49MI3 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CERKLQ49MI3 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CERKLQ49MI3 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.7■□□□□ 0.26
CERKLQ49MI3 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC16.7■□□□□ 0.26
CERKLQ49MI3 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CERKLQ49MI3 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CERKLQ49MI3 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC16.7■□□□□ 0.26
CERKLQ49MI3 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CERKLQ49MI3 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC16.7■□□□□ 0.26
CERKLQ49MI3 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CERKLQ49MI3 AC103592.1-201ENST00000394513 664 ntBASIC16.7■□□□□ 0.26
CERKLQ49MI3 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC16.7■□□□□ 0.26
CERKLQ49MI3 PPP1R2P4-201ENST00000424051 595 ntBASIC16.7■□□□□ 0.26
CERKLQ49MI3 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC16.7■□□□□ 0.26
CERKLQ49MI3 AC004837.1-201ENST00000446267 564 ntBASIC16.7■□□□□ 0.26
CERKLQ49MI3 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC16.7■□□□□ 0.26
CERKLQ49MI3 AC145285.5-201ENST00000562217 361 ntBASIC16.7■□□□□ 0.26
CERKLQ49MI3 CMC2-204ENST00000562713 573 ntTSL 3 BASIC16.7■□□□□ 0.26
CERKLQ49MI3 CMC2-209ENST00000565108 399 ntTSL 2 BASIC16.7■□□□□ 0.26
CERKLQ49MI3 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC16.7■□□□□ 0.26
CERKLQ49MI3 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC16.7■□□□□ 0.26
CERKLQ49MI3 AC105137.3-201ENST00000617588 984 ntBASIC16.7■□□□□ 0.26
CERKLQ49MI3 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CERKLQ49MI3 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CERKLQ49MI3 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CERKLQ49MI3 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CERKLQ49MI3 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CERKLQ49MI3 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CERKLQ49MI3 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CERKLQ49MI3 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CERKLQ49MI3 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.7■□□□□ 0.26
CERKLQ49MI3 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CERKLQ49MI3 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
CERKLQ49MI3 AC140479.7-201ENST00000636301 2332 ntBASIC16.7■□□□□ 0.26
CERKLQ49MI3 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CERKLQ49MI3 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC16.7■□□□□ 0.26
CERKLQ49MI3 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CERKLQ49MI3 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CERKLQ49MI3 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC16.69■□□□□ 0.26
CERKLQ49MI3 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CERKLQ49MI3 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.69■□□□□ 0.26
CERKLQ49MI3 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CERKLQ49MI3 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
CERKLQ49MI3 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CERKLQ49MI3 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC16.69■□□□□ 0.26
CERKLQ49MI3 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CERKLQ49MI3 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CERKLQ49MI3 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC16.69■□□□□ 0.26
CERKLQ49MI3 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CERKLQ49MI3 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CERKLQ49MI3 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CERKLQ49MI3 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CERKLQ49MI3 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC16.69■□□□□ 0.26
CERKLQ49MI3 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC16.69■□□□□ 0.26
CERKLQ49MI3 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC16.69■□□□□ 0.26
CERKLQ49MI3 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC16.69■□□□□ 0.26
CERKLQ49MI3 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms