Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
IRX3P78415 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
IRX3P78415 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC16.84■□□□□ 0.29
IRX3P78415 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
IRX3P78415 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
IRX3P78415 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.84■□□□□ 0.29
IRX3P78415 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
IRX3P78415 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.84■□□□□ 0.29
IRX3P78415 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
IRX3P78415 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
IRX3P78415 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
IRX3P78415 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
IRX3P78415 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
IRX3P78415 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
IRX3P78415 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
IRX3P78415 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
IRX3P78415 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
IRX3P78415 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
IRX3P78415 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
IRX3P78415 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
IRX3P78415 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
IRX3P78415 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
IRX3P78415 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
IRX3P78415 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
IRX3P78415 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
IRX3P78415 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
IRX3P78415 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC16.83■□□□□ 0.28
IRX3P78415 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
IRX3P78415 AC012362.1-201ENST00000434906 739 ntBASIC16.83■□□□□ 0.28
IRX3P78415 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC16.83■□□□□ 0.28
IRX3P78415 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
IRX3P78415 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC16.83■□□□□ 0.28
IRX3P78415 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC16.83■□□□□ 0.28
IRX3P78415 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC16.83■□□□□ 0.28
IRX3P78415 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC16.83■□□□□ 0.28
IRX3P78415 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
IRX3P78415 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC16.83■□□□□ 0.28
IRX3P78415 AC124068.2-201ENST00000569473 1109 ntBASIC16.83■□□□□ 0.28
IRX3P78415 NUDT4P2-201ENST00000578341 546 ntBASIC16.83■□□□□ 0.28
IRX3P78415 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
IRX3P78415 DRG2-220ENST00000583355 891 ntTSL 3 BASIC16.83■□□□□ 0.28
IRX3P78415 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
IRX3P78415 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC16.83■□□□□ 0.28
IRX3P78415 AC107464.3-201ENST00000609172 737 ntBASIC16.83■□□□□ 0.28
IRX3P78415 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC16.83■□□□□ 0.28
IRX3P78415 AC009560.1-201ENST00000620208 434 ntBASIC16.83■□□□□ 0.28
IRX3P78415 MIR6858-201ENST00000620733 67 ntBASIC16.83■□□□□ 0.28
IRX3P78415 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
IRX3P78415 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
IRX3P78415 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
IRX3P78415 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
IRX3P78415 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
IRX3P78415 AC041040.2-201ENST00000622926 2899 ntBASIC16.83■□□□□ 0.28
IRX3P78415 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
IRX3P78415 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
IRX3P78415 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IRX3P78415 DGCR9-201ENST00000609630 2415 ntBASIC16.82■□□□□ 0.28
IRX3P78415 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IRX3P78415 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
IRX3P78415 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.82■□□□□ 0.28
IRX3P78415 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IRX3P78415 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IRX3P78415 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
IRX3P78415 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
IRX3P78415 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
IRX3P78415 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
IRX3P78415 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IRX3P78415 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
IRX3P78415 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
IRX3P78415 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC16.82■□□□□ 0.28
IRX3P78415 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IRX3P78415 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC16.82■□□□□ 0.28
IRX3P78415 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IRX3P78415 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC16.82■□□□□ 0.28
IRX3P78415 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC16.82■□□□□ 0.28
IRX3P78415 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
IRX3P78415 RPL13AP19-201ENST00000434320 584 ntBASIC16.82■□□□□ 0.28
IRX3P78415 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC16.82■□□□□ 0.28
IRX3P78415 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC16.82■□□□□ 0.28
IRX3P78415 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC16.82■□□□□ 0.28
IRX3P78415 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
IRX3P78415 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC16.82■□□□□ 0.28
IRX3P78415 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC16.82■□□□□ 0.28
IRX3P78415 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC16.82■□□□□ 0.28
IRX3P78415 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
IRX3P78415 AC073911.3-201ENST00000624401 631 ntBASIC16.82■□□□□ 0.28
IRX3P78415 AL161773.1-201ENST00000624845 863 ntBASIC16.82■□□□□ 0.28
IRX3P78415 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
IRX3P78415 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
IRX3P78415 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IRX3P78415 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
IRX3P78415 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
IRX3P78415 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
IRX3P78415 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
IRX3P78415 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
IRX3P78415 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
IRX3P78415 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IRX3P78415 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
IRX3P78415 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
IRX3P78415 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms