Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SKP1P63208 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SKP1P63208 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SKP1P63208 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SKP1P63208 AGER-203ENST00000375065 665 ntTSL 2 BASIC13.71□□□□□ -0.21
SKP1P63208 USP17L6P-201ENST00000382470 1197 ntBASIC13.71□□□□□ -0.21
SKP1P63208 MIR769-201ENST00000390225 118 ntBASIC13.71□□□□□ -0.21
SKP1P63208 KRT18P36-201ENST00000411618 1276 ntBASIC13.71□□□□□ -0.21
SKP1P63208 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.71□□□□□ -0.21
SKP1P63208 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC13.71□□□□□ -0.21
SKP1P63208 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC13.71□□□□□ -0.21
SKP1P63208 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.71□□□□□ -0.21
SKP1P63208 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC13.71□□□□□ -0.21
SKP1P63208 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.71□□□□□ -0.21
SKP1P63208 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC13.71□□□□□ -0.21
SKP1P63208 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC13.71□□□□□ -0.21
SKP1P63208 MIR3188-201ENST00000583494 85 ntBASIC13.71□□□□□ -0.21
SKP1P63208 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC13.71□□□□□ -0.21
SKP1P63208 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SKP1P63208 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.71□□□□□ -0.21
SKP1P63208 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
SKP1P63208 AC139749.1-202ENST00000617529 3139 ntBASIC13.71□□□□□ -0.21
SKP1P63208 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SKP1P63208 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SKP1P63208 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SKP1P63208 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.71□□□□□ -0.22
SKP1P63208 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SKP1P63208 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
SKP1P63208 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
SKP1P63208 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SKP1P63208 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
SKP1P63208 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
SKP1P63208 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SKP1P63208 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SKP1P63208 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.71□□□□□ -0.22
SKP1P63208 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SKP1P63208 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.71□□□□□ -0.22
SKP1P63208 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
SKP1P63208 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
SKP1P63208 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
SKP1P63208 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SKP1P63208 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SKP1P63208 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SKP1P63208 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SKP1P63208 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SKP1P63208 PTENP1-202ENST00000532280 3996 ntBASIC13.7□□□□□ -0.22
SKP1P63208 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SKP1P63208 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SKP1P63208 AP001267.2-201ENST00000532619 2086 ntBASIC13.7□□□□□ -0.22
SKP1P63208 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SKP1P63208 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC13.7□□□□□ -0.22
SKP1P63208 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SKP1P63208 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
SKP1P63208 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SKP1P63208 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.7□□□□□ -0.22
SKP1P63208 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SKP1P63208 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SKP1P63208 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.7□□□□□ -0.22
SKP1P63208 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SKP1P63208 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
SKP1P63208 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SKP1P63208 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
SKP1P63208 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SKP1P63208 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SKP1P63208 CRCP-204ENST00000398684 492 ntTSL 2 BASIC13.7□□□□□ -0.22
SKP1P63208 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SKP1P63208 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC13.7□□□□□ -0.22
SKP1P63208 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC13.7□□□□□ -0.22
SKP1P63208 BX284668.4-201ENST00000453917 508 ntBASIC13.7□□□□□ -0.22
SKP1P63208 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.7□□□□□ -0.22
SKP1P63208 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.7□□□□□ -0.22
SKP1P63208 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC13.7□□□□□ -0.22
SKP1P63208 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SKP1P63208 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SKP1P63208 AC244093.1-201ENST00000610837 814 ntBASIC13.7□□□□□ -0.22
SKP1P63208 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC13.7□□□□□ -0.22
SKP1P63208 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.7□□□□□ -0.22
SKP1P63208 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC13.7□□□□□ -0.22
SKP1P63208 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SKP1P63208 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.7□□□□□ -0.22
SKP1P63208 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SKP1P63208 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
SKP1P63208 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.7□□□□□ -0.22
SKP1P63208 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SKP1P63208 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SKP1P63208 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SKP1P63208 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SKP1P63208 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SKP1P63208 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SKP1P63208 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SKP1P63208 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SKP1P63208 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.7□□□□□ -0.22
SKP1P63208 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SKP1P63208 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SKP1P63208 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
SKP1P63208 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
SKP1P63208 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SKP1P63208 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
SKP1P63208 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SKP1P63208 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms