Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VBP1P61758 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC12.94□□□□□ -0.34
VBP1P61758 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
VBP1P61758 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
VBP1P61758 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC12.94□□□□□ -0.34
VBP1P61758 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VBP1P61758 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VBP1P61758 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VBP1P61758 MSNP1-201ENST00000511640 1732 ntBASIC12.93□□□□□ -0.34
VBP1P61758 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VBP1P61758 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VBP1P61758 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
VBP1P61758 AC010547.1-201ENST00000500612 2793 ntTSL 2 BASIC12.93□□□□□ -0.34
VBP1P61758 AC139712.1-201ENST00000378256 1875 ntBASIC12.93□□□□□ -0.34
VBP1P61758 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC12.93□□□□□ -0.34
VBP1P61758 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VBP1P61758 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC12.93□□□□□ -0.34
VBP1P61758 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VBP1P61758 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VBP1P61758 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
VBP1P61758 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
VBP1P61758 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC12.93□□□□□ -0.34
VBP1P61758 PML-210ENST00000563500 4502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
VBP1P61758 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VBP1P61758 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
VBP1P61758 SLC5A8-201ENST00000536262 4178 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VBP1P61758 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.93□□□□□ -0.34
VBP1P61758 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VBP1P61758 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VBP1P61758 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
VBP1P61758 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.93□□□□□ -0.34
VBP1P61758 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.93□□□□□ -0.34
VBP1P61758 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC12.93□□□□□ -0.34
VBP1P61758 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC12.93□□□□□ -0.34
VBP1P61758 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC12.93□□□□□ -0.34
VBP1P61758 AC026434.2-201ENST00000506094 1078 ntBASIC12.93□□□□□ -0.34
VBP1P61758 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
VBP1P61758 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC12.93□□□□□ -0.34
VBP1P61758 AC131206.1-201ENST00000538078 1211 ntBASIC12.93□□□□□ -0.34
VBP1P61758 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC12.93□□□□□ -0.34
VBP1P61758 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
VBP1P61758 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC12.93□□□□□ -0.34
VBP1P61758 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
VBP1P61758 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VBP1P61758 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VBP1P61758 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VBP1P61758 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC12.93□□□□□ -0.34
VBP1P61758 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
VBP1P61758 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
VBP1P61758 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VBP1P61758 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC12.93□□□□□ -0.34
VBP1P61758 AC022364.1-202ENST00000617468 2409 ntBASIC12.93□□□□□ -0.34
VBP1P61758 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC12.93□□□□□ -0.34
VBP1P61758 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC12.93□□□□□ -0.34
VBP1P61758 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.93□□□□□ -0.34
VBP1P61758 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
VBP1P61758 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
VBP1P61758 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VBP1P61758 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
VBP1P61758 BANK1-202ENST00000428908 3044 ntTSL 5 BASIC12.93□□□□□ -0.34
VBP1P61758 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
VBP1P61758 ABL2-207ENST00000507173 3177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
VBP1P61758 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC12.93□□□□□ -0.34
VBP1P61758 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
VBP1P61758 AL035456.1-201ENST00000456064 1369 ntBASIC12.93□□□□□ -0.34
VBP1P61758 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VBP1P61758 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.93□□□□□ -0.34
VBP1P61758 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
VBP1P61758 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
VBP1P61758 CIC-204ENST00000572681 8218 ntTSL 5 BASIC12.93□□□□□ -0.34
VBP1P61758 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC12.93□□□□□ -0.34
VBP1P61758 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VBP1P61758 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC12.92□□□□□ -0.34
VBP1P61758 AOC4P-203ENST00000566825 2289 ntBASIC12.92□□□□□ -0.34
VBP1P61758 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
VBP1P61758 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.92□□□□□ -0.34
VBP1P61758 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
VBP1P61758 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
VBP1P61758 NDRG4-201ENST00000258187 3324 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VBP1P61758 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
VBP1P61758 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
VBP1P61758 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
VBP1P61758 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC12.92□□□□□ -0.34
VBP1P61758 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VBP1P61758 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC12.92□□□□□ -0.34
VBP1P61758 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VBP1P61758 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VBP1P61758 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VBP1P61758 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC12.92□□□□□ -0.34
VBP1P61758 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.92□□□□□ -0.34
VBP1P61758 BEX3-201ENST00000361298 921 ntTSL 2 BASIC12.92□□□□□ -0.34
VBP1P61758 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
VBP1P61758 PRPF4-201ENST00000374198 2787 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
VBP1P61758 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VBP1P61758 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.92□□□□□ -0.34
VBP1P61758 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
VBP1P61758 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
VBP1P61758 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC12.92□□□□□ -0.34
VBP1P61758 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
VBP1P61758 SERBP1P3-201ENST00000459980 809 ntBASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms