Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.63□□□□□ -0.23
RPS3AP61247 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPS3AP61247 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPS3AP61247 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC13.63□□□□□ -0.23
RPS3AP61247 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC13.63□□□□□ -0.23
RPS3AP61247 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
RPS3AP61247 TPT1P11-201ENST00000458482 498 ntBASIC13.63□□□□□ -0.23
RPS3AP61247 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.63□□□□□ -0.23
RPS3AP61247 RNA5SP486-201ENST00000515961 83 ntBASIC13.63□□□□□ -0.23
RPS3AP61247 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.63□□□□□ -0.23
RPS3AP61247 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
RPS3AP61247 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
RPS3AP61247 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
RPS3AP61247 GNRHR2-203ENST00000581100 1187 ntBASIC13.63□□□□□ -0.23
RPS3AP61247 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.63□□□□□ -0.23
RPS3AP61247 MIR6775-201ENST00000617557 69 ntBASIC13.63□□□□□ -0.23
RPS3AP61247 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
RPS3AP61247 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPS3AP61247 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
RPS3AP61247 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC13.63□□□□□ -0.23
RPS3AP61247 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC13.63□□□□□ -0.23
RPS3AP61247 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.63□□□□□ -0.23
RPS3AP61247 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPS3AP61247 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.63□□□□□ -0.23
RPS3AP61247 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPS3AP61247 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPS3AP61247 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPS3AP61247 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPS3AP61247 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.63□□□□□ -0.23
RPS3AP61247 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPS3AP61247 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPS3AP61247 PES1-204ENST00000402284 2144 ntTSL 5 BASIC13.63□□□□□ -0.23
RPS3AP61247 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
RPS3AP61247 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPS3AP61247 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPS3AP61247 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPS3AP61247 AL138709.1-201ENST00000614840 1693 ntBASIC13.63□□□□□ -0.23
RPS3AP61247 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPS3AP61247 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
RPS3AP61247 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPS3AP61247 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPS3AP61247 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPS3AP61247 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPS3AP61247 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPS3AP61247 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
RPS3AP61247 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPS3AP61247 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
RPS3AP61247 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
RPS3AP61247 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.62□□□□□ -0.23
RPS3AP61247 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.62□□□□□ -0.23
RPS3AP61247 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPS3AP61247 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.62□□□□□ -0.23
RPS3AP61247 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RPS3AP61247 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPS3AP61247 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RPS3AP61247 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RPS3AP61247 AC092053.3-201ENST00000641308 4975 ntBASIC13.62□□□□□ -0.23
RPS3AP61247 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPS3AP61247 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
RPS3AP61247 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RPS3AP61247 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPS3AP61247 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.62□□□□□ -0.23
RPS3AP61247 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPS3AP61247 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.62□□□□□ -0.23
RPS3AP61247 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
RPS3AP61247 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.62□□□□□ -0.23
RPS3AP61247 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RPS3AP61247 FO681548.1-201ENST00000455617 1132 ntBASIC13.62□□□□□ -0.23
RPS3AP61247 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPS3AP61247 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.62□□□□□ -0.23
RPS3AP61247 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.62□□□□□ -0.23
RPS3AP61247 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
RPS3AP61247 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
RPS3AP61247 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RPS3AP61247 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RPS3AP61247 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.62□□□□□ -0.23
RPS3AP61247 AC023310.1-201ENST00000554836 735 ntBASIC13.62□□□□□ -0.23
RPS3AP61247 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.62□□□□□ -0.23
RPS3AP61247 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.62□□□□□ -0.23
RPS3AP61247 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC13.62□□□□□ -0.23
RPS3AP61247 AC244669.2-201ENST00000612320 853 ntBASIC13.62□□□□□ -0.23
RPS3AP61247 AC138951.2-201ENST00000623455 1161 ntBASIC13.62□□□□□ -0.23
RPS3AP61247 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.62□□□□□ -0.23
RPS3AP61247 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPS3AP61247 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPS3AP61247 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.62□□□□□ -0.23
RPS3AP61247 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.62□□□□□ -0.23
RPS3AP61247 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPS3AP61247 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.62□□□□□ -0.23
RPS3AP61247 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RPS3AP61247 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPS3AP61247 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
RPS3AP61247 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPS3AP61247 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RPS3AP61247 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPS3AP61247 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
RPS3AP61247 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
RPS3AP61247 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC13.62□□□□□ -0.23
RPS3AP61247 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
RPS3AP61247 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms