Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.83□□□□□ -0.2
VSX2P58304 OR2R1P-201ENST00000441404 914 ntBASIC13.83□□□□□ -0.2
VSX2P58304 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.83□□□□□ -0.2
VSX2P58304 IGHJ2P-201ENST00000454480 60 ntBASIC13.83□□□□□ -0.2
VSX2P58304 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VSX2P58304 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.83□□□□□ -0.2
VSX2P58304 CCNC-217ENST00000523985 958 ntTSL 2 BASIC13.83□□□□□ -0.2
VSX2P58304 AC090857.1-201ENST00000527400 390 ntBASIC13.83□□□□□ -0.2
VSX2P58304 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC13.83□□□□□ -0.2
VSX2P58304 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC13.83□□□□□ -0.2
VSX2P58304 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC13.83□□□□□ -0.2
VSX2P58304 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VSX2P58304 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VSX2P58304 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VSX2P58304 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
VSX2P58304 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VSX2P58304 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VSX2P58304 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VSX2P58304 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
VSX2P58304 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.83□□□□□ -0.2
VSX2P58304 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
VSX2P58304 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.83□□□□□ -0.2
VSX2P58304 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.83□□□□□ -0.2
VSX2P58304 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
VSX2P58304 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
VSX2P58304 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
VSX2P58304 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
VSX2P58304 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VSX2P58304 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
VSX2P58304 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VSX2P58304 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
VSX2P58304 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
VSX2P58304 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
VSX2P58304 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
VSX2P58304 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
VSX2P58304 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
VSX2P58304 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VSX2P58304 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
VSX2P58304 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
VSX2P58304 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
VSX2P58304 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
VSX2P58304 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
VSX2P58304 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
VSX2P58304 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VSX2P58304 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VSX2P58304 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.82□□□□□ -0.2
VSX2P58304 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VSX2P58304 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
VSX2P58304 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VSX2P58304 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VSX2P58304 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
VSX2P58304 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.82□□□□□ -0.2
VSX2P58304 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
VSX2P58304 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VSX2P58304 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
VSX2P58304 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.82□□□□□ -0.2
VSX2P58304 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.82□□□□□ -0.2
VSX2P58304 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VSX2P58304 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VSX2P58304 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
VSX2P58304 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VSX2P58304 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
VSX2P58304 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
VSX2P58304 AL161932.2-201ENST00000435436 679 ntBASIC13.82□□□□□ -0.2
VSX2P58304 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC13.82□□□□□ -0.2
VSX2P58304 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.82□□□□□ -0.2
VSX2P58304 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC13.82□□□□□ -0.2
VSX2P58304 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13.82□□□□□ -0.2
VSX2P58304 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC13.82□□□□□ -0.2
VSX2P58304 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC13.82□□□□□ -0.2
VSX2P58304 AC021016.3-201ENST00000608367 477 ntBASIC13.82□□□□□ -0.2
VSX2P58304 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC13.82□□□□□ -0.2
VSX2P58304 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC13.82□□□□□ -0.2
VSX2P58304 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
VSX2P58304 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.82□□□□□ -0.2
VSX2P58304 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
VSX2P58304 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.82□□□□□ -0.2
VSX2P58304 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
VSX2P58304 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
VSX2P58304 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VSX2P58304 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
VSX2P58304 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VSX2P58304 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
VSX2P58304 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
VSX2P58304 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.82□□□□□ -0.2
VSX2P58304 AC010327.5-201ENST00000586923 3061 ntBASIC13.82□□□□□ -0.2
VSX2P58304 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.82□□□□□ -0.2
VSX2P58304 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
VSX2P58304 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.81□□□□□ -0.2
VSX2P58304 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VSX2P58304 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.81□□□□□ -0.2
VSX2P58304 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VSX2P58304 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
VSX2P58304 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VSX2P58304 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VSX2P58304 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VSX2P58304 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.81□□□□□ -0.2
VSX2P58304 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
VSX2P58304 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
VSX2P58304 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms