Protein–RNA interactions for Protein: P55212

CASP6, Caspase-6, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP6P55212 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.04□□□□□ -0.32
CASP6P55212 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CASP6P55212 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC13.04□□□□□ -0.32
CASP6P55212 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CASP6P55212 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CASP6P55212 MRPL37P1-201ENST00000592451 1337 ntBASIC13.04□□□□□ -0.32
CASP6P55212 AC005840.4-201ENST00000541242 2494 ntBASIC13.04□□□□□ -0.32
CASP6P55212 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.04□□□□□ -0.32
CASP6P55212 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.04□□□□□ -0.32
CASP6P55212 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CASP6P55212 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CASP6P55212 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CASP6P55212 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.04□□□□□ -0.32
CASP6P55212 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CASP6P55212 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CASP6P55212 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CASP6P55212 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CASP6P55212 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CASP6P55212 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.04□□□□□ -0.32
CASP6P55212 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CASP6P55212 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CASP6P55212 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CASP6P55212 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.04□□□□□ -0.32
CASP6P55212 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.04□□□□□ -0.32
CASP6P55212 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.03□□□□□ -0.32
CASP6P55212 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CASP6P55212 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CASP6P55212 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.03□□□□□ -0.32
CASP6P55212 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CASP6P55212 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.03□□□□□ -0.32
CASP6P55212 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CASP6P55212 CYP4F23P-201ENST00000593402 1579 ntBASIC13.03□□□□□ -0.32
CASP6P55212 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CASP6P55212 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CASP6P55212 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CASP6P55212 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CASP6P55212 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.03□□□□□ -0.32
CASP6P55212 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CASP6P55212 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.03□□□□□ -0.32
CASP6P55212 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.03□□□□□ -0.32
CASP6P55212 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CASP6P55212 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CASP6P55212 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.03□□□□□ -0.32
CASP6P55212 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CASP6P55212 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CASP6P55212 RNA5SP359-201ENST00000364838 113 ntBASIC13.03□□□□□ -0.32
CASP6P55212 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CASP6P55212 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.03□□□□□ -0.32
CASP6P55212 DUX4L50-201ENST00000455245 715 ntBASIC13.03□□□□□ -0.32
CASP6P55212 AC018463.1-201ENST00000456674 917 ntBASIC13.03□□□□□ -0.32
CASP6P55212 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC13.03□□□□□ -0.32
CASP6P55212 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
CASP6P55212 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC13.03□□□□□ -0.32
CASP6P55212 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.03□□□□□ -0.32
CASP6P55212 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CASP6P55212 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
CASP6P55212 FOS-204ENST00000554617 796 ntTSL 2 BASIC13.03□□□□□ -0.32
CASP6P55212 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC13.03□□□□□ -0.32
CASP6P55212 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC13.03□□□□□ -0.32
CASP6P55212 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC13.03□□□□□ -0.32
CASP6P55212 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC13.03□□□□□ -0.32
CASP6P55212 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CASP6P55212 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CASP6P55212 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CASP6P55212 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CASP6P55212 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CASP6P55212 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.03□□□□□ -0.32
CASP6P55212 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
CASP6P55212 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CASP6P55212 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CASP6P55212 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.03□□□□□ -0.32
CASP6P55212 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.03□□□□□ -0.32
CASP6P55212 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CASP6P55212 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CASP6P55212 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CASP6P55212 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.03□□□□□ -0.32
CASP6P55212 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CASP6P55212 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CASP6P55212 AP000845.1-201ENST00000581677 2131 ntBASIC13.03□□□□□ -0.32
CASP6P55212 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CASP6P55212 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CASP6P55212 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CASP6P55212 LINC01165-201ENST00000445190 1623 ntBASIC13.02□□□□□ -0.32
CASP6P55212 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CASP6P55212 FAS-202ENST00000352159 1722 ntTSL 5 BASIC13.02□□□□□ -0.32
CASP6P55212 MARK2P16-201ENST00000605714 1723 ntBASIC13.02□□□□□ -0.32
CASP6P55212 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
CASP6P55212 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC13.02□□□□□ -0.32
CASP6P55212 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CASP6P55212 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.02□□□□□ -0.32
CASP6P55212 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.02□□□□□ -0.32
CASP6P55212 AC007292.2-201ENST00000593524 1812 ntBASIC13.02□□□□□ -0.32
CASP6P55212 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC13.02□□□□□ -0.32
CASP6P55212 AC020658.6-201ENST00000623564 1870 ntBASIC13.02□□□□□ -0.32
CASP6P55212 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
CASP6P55212 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CASP6P55212 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
CASP6P55212 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
CASP6P55212 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.02□□□□□ -0.32
CASP6P55212 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 199.9 ms