Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CACNB3P54284 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CACNB3P54284 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CACNB3P54284 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CACNB3P54284 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CACNB3P54284 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC16.86■□□□□ 0.29
CACNB3P54284 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CACNB3P54284 SARS-202ENST00000369923 1882 ntTSL 5 BASIC16.86■□□□□ 0.29
CACNB3P54284 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CACNB3P54284 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CACNB3P54284 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CACNB3P54284 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CACNB3P54284 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CACNB3P54284 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CACNB3P54284 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC16.86■□□□□ 0.29
CACNB3P54284 AL022313.4-201ENST00000562756 2046 ntBASIC16.86■□□□□ 0.29
CACNB3P54284 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC16.86■□□□□ 0.29
CACNB3P54284 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.86■□□□□ 0.29
CACNB3P54284 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.86■□□□□ 0.29
CACNB3P54284 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CACNB3P54284 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CACNB3P54284 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CACNB3P54284 SPATA8-201ENST00000328504 1083 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CACNB3P54284 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CACNB3P54284 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC16.86■□□□□ 0.29
CACNB3P54284 BCAS2P2-201ENST00000425064 674 ntBASIC16.86■□□□□ 0.29
CACNB3P54284 KRT17P4-201ENST00000429445 819 ntBASIC16.86■□□□□ 0.29
CACNB3P54284 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC16.86■□□□□ 0.29
CACNB3P54284 SLC25A15P3-201ENST00000505530 290 ntBASIC16.86■□□□□ 0.29
CACNB3P54284 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CACNB3P54284 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC16.86■□□□□ 0.29
CACNB3P54284 AC244250.3-201ENST00000620749 366 ntBASIC16.86■□□□□ 0.29
CACNB3P54284 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC16.86■□□□□ 0.29
CACNB3P54284 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CACNB3P54284 PDXDC2P-206ENST00000534700 1315 ntBASIC16.86■□□□□ 0.29
CACNB3P54284 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CACNB3P54284 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CACNB3P54284 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CACNB3P54284 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC16.86■□□□□ 0.29
CACNB3P54284 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CACNB3P54284 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CACNB3P54284 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CACNB3P54284 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CACNB3P54284 KRT8P43-201ENST00000406052 1458 ntBASIC16.86■□□□□ 0.29
CACNB3P54284 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
CACNB3P54284 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CACNB3P54284 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC16.85■□□□□ 0.29
CACNB3P54284 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.85■□□□□ 0.29
CACNB3P54284 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
CACNB3P54284 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC16.85■□□□□ 0.29
CACNB3P54284 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CACNB3P54284 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CACNB3P54284 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CACNB3P54284 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC16.85■□□□□ 0.29
CACNB3P54284 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CACNB3P54284 AC097359.2-201ENST00000604992 2389 ntBASIC16.85■□□□□ 0.29
CACNB3P54284 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CACNB3P54284 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CACNB3P54284 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CACNB3P54284 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CACNB3P54284 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CACNB3P54284 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC16.85■□□□□ 0.29
CACNB3P54284 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CACNB3P54284 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CACNB3P54284 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CACNB3P54284 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
CACNB3P54284 ACTG1P19-201ENST00000418987 1116 ntBASIC16.85■□□□□ 0.29
CACNB3P54284 PSMD4P1-201ENST00000433951 1109 ntBASIC16.85■□□□□ 0.29
CACNB3P54284 RN7SL23P-201ENST00000484055 275 ntBASIC16.85■□□□□ 0.29
CACNB3P54284 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CACNB3P54284 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC16.85■□□□□ 0.29
CACNB3P54284 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CACNB3P54284 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC16.85■□□□□ 0.29
CACNB3P54284 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CACNB3P54284 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC16.85■□□□□ 0.29
CACNB3P54284 VENTXP3-201ENST00000546480 773 ntBASIC16.85■□□□□ 0.29
CACNB3P54284 AL132994.1-201ENST00000554098 400 ntBASIC16.85■□□□□ 0.29
CACNB3P54284 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC16.85■□□□□ 0.29
CACNB3P54284 TRMT112P3-201ENST00000580149 358 ntBASIC16.85■□□□□ 0.29
CACNB3P54284 THY1-209ENST00000580275 578 ntTSL 3 BASIC16.85■□□□□ 0.29
CACNB3P54284 MIR4265-201ENST00000582152 99 ntBASIC16.85■□□□□ 0.29
CACNB3P54284 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC16.85■□□□□ 0.29
CACNB3P54284 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC16.85■□□□□ 0.29
CACNB3P54284 AC010976.2-201ENST00000609697 852 ntBASIC16.85■□□□□ 0.29
CACNB3P54284 MIR6074-201ENST00000612054 107 ntBASIC16.85■□□□□ 0.29
CACNB3P54284 HPX-213ENST00000615166 826 ntTSL 5 BASIC16.85■□□□□ 0.29
CACNB3P54284 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC16.85■□□□□ 0.29
CACNB3P54284 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CACNB3P54284 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CACNB3P54284 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CACNB3P54284 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CACNB3P54284 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CACNB3P54284 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CACNB3P54284 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CACNB3P54284 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
CACNB3P54284 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CACNB3P54284 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CACNB3P54284 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CACNB3P54284 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
CACNB3P54284 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms