Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.91■□□□□ 0.3
MRE11P49959 FADS2-212ENST00000522639 360 ntTSL 5 BASIC16.91■□□□□ 0.3
MRE11P49959 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MRE11P49959 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.91■□□□□ 0.3
MRE11P49959 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
MRE11P49959 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
MRE11P49959 AC079328.1-201ENST00000560358 952 ntBASIC16.91■□□□□ 0.3
MRE11P49959 FADS2-215ENST00000574708 385 ntTSL 3 BASIC16.91■□□□□ 0.3
MRE11P49959 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.91■□□□□ 0.3
MRE11P49959 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC16.91■□□□□ 0.3
MRE11P49959 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MRE11P49959 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.91■□□□□ 0.3
MRE11P49959 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MRE11P49959 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MRE11P49959 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MRE11P49959 F2-205ENST00000530231 1849 ntTSL 5 BASIC16.91■□□□□ 0.3
MRE11P49959 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC16.91■□□□□ 0.3
MRE11P49959 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
MRE11P49959 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
MRE11P49959 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC16.91■□□□□ 0.3
MRE11P49959 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
MRE11P49959 PCDHA5-203ENST00000614258 4248 ntBASIC16.91■□□□□ 0.3
MRE11P49959 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
MRE11P49959 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MRE11P49959 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MRE11P49959 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MRE11P49959 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.9■□□□□ 0.3
MRE11P49959 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
MRE11P49959 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC16.9■□□□□ 0.3
MRE11P49959 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
MRE11P49959 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MRE11P49959 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MRE11P49959 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC16.9■□□□□ 0.3
MRE11P49959 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MRE11P49959 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
MRE11P49959 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC16.9■□□□□ 0.3
MRE11P49959 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
MRE11P49959 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC16.9■□□□□ 0.3
MRE11P49959 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MRE11P49959 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.9■□□□□ 0.3
MRE11P49959 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.9■□□□□ 0.3
MRE11P49959 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
MRE11P49959 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.9■□□□□ 0.3
MRE11P49959 FO393414.2-201ENST00000405153 598 ntBASIC16.9■□□□□ 0.3
MRE11P49959 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.9■□□□□ 0.3
MRE11P49959 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC16.9■□□□□ 0.3
MRE11P49959 TMEM14DP-201ENST00000422205 345 ntBASIC16.9■□□□□ 0.3
MRE11P49959 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.9■□□□□ 0.3
MRE11P49959 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MRE11P49959 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MRE11P49959 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
MRE11P49959 CHCHD2P3-201ENST00000603038 451 ntBASIC16.9■□□□□ 0.3
MRE11P49959 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
MRE11P49959 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
MRE11P49959 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
MRE11P49959 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MRE11P49959 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MRE11P49959 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
MRE11P49959 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MRE11P49959 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
MRE11P49959 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.9■□□□□ 0.3
MRE11P49959 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.9■□□□□ 0.3
MRE11P49959 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
MRE11P49959 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC16.9■□□□□ 0.3
MRE11P49959 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
MRE11P49959 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
MRE11P49959 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
MRE11P49959 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
MRE11P49959 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
MRE11P49959 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.9■□□□□ 0.3
MRE11P49959 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.89■□□□□ 0.3
MRE11P49959 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
MRE11P49959 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.3
MRE11P49959 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
MRE11P49959 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
MRE11P49959 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC16.89■□□□□ 0.29
MRE11P49959 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MRE11P49959 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MRE11P49959 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
MRE11P49959 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MRE11P49959 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
MRE11P49959 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC16.89■□□□□ 0.29
MRE11P49959 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
MRE11P49959 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MRE11P49959 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
MRE11P49959 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
MRE11P49959 ANKRD19P-201ENST00000338192 862 ntBASIC16.89■□□□□ 0.29
MRE11P49959 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
MRE11P49959 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.89■□□□□ 0.29
MRE11P49959 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.89■□□□□ 0.29
MRE11P49959 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.89■□□□□ 0.29
MRE11P49959 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.89■□□□□ 0.29
MRE11P49959 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.89■□□□□ 0.29
MRE11P49959 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.89■□□□□ 0.29
MRE11P49959 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.89■□□□□ 0.29
MRE11P49959 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC16.89■□□□□ 0.29
MRE11P49959 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.89■□□□□ 0.29
MRE11P49959 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
MRE11P49959 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
MRE11P49959 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms