Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
USP8P40818 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC15.82■□□□□ 0.12
USP8P40818 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
USP8P40818 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
USP8P40818 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC15.81■□□□□ 0.12
USP8P40818 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
USP8P40818 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
USP8P40818 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
USP8P40818 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
USP8P40818 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
USP8P40818 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
USP8P40818 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
USP8P40818 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC15.81■□□□□ 0.12
USP8P40818 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.81■□□□□ 0.12
USP8P40818 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
USP8P40818 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
USP8P40818 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
USP8P40818 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.81■□□□□ 0.12
USP8P40818 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
USP8P40818 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
USP8P40818 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC15.81■□□□□ 0.12
USP8P40818 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
USP8P40818 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
USP8P40818 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
USP8P40818 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
USP8P40818 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.81■□□□□ 0.12
USP8P40818 HIST1H2BPS3-201ENST00000419683 341 ntBASIC15.81■□□□□ 0.12
USP8P40818 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
USP8P40818 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC15.81■□□□□ 0.12
USP8P40818 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.81■□□□□ 0.12
USP8P40818 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.81■□□□□ 0.12
USP8P40818 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC15.81■□□□□ 0.12
USP8P40818 PDIA3P1-201ENST00000471856 1510 ntBASIC15.81■□□□□ 0.12
USP8P40818 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC15.81■□□□□ 0.12
USP8P40818 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC15.81■□□□□ 0.12
USP8P40818 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.81■□□□□ 0.12
USP8P40818 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.81■□□□□ 0.12
USP8P40818 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
USP8P40818 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
USP8P40818 RN7SL713P-201ENST00000582127 302 ntBASIC15.81■□□□□ 0.12
USP8P40818 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
USP8P40818 AP001002.3-201ENST00000623482 206 ntBASIC15.81■□□□□ 0.12
USP8P40818 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.81■□□□□ 0.12
USP8P40818 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
USP8P40818 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
USP8P40818 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
USP8P40818 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
USP8P40818 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
USP8P40818 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
USP8P40818 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
USP8P40818 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
USP8P40818 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
USP8P40818 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.8■□□□□ 0.12
USP8P40818 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
USP8P40818 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
USP8P40818 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
USP8P40818 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.8■□□□□ 0.12
USP8P40818 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
USP8P40818 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
USP8P40818 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
USP8P40818 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
USP8P40818 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC15.8■□□□□ 0.12
USP8P40818 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
USP8P40818 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
USP8P40818 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
USP8P40818 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
USP8P40818 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
USP8P40818 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
USP8P40818 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
USP8P40818 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
USP8P40818 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
USP8P40818 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
USP8P40818 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
USP8P40818 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
USP8P40818 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.8■□□□□ 0.12
USP8P40818 CD8B2-202ENST00000417670 633 ntBASIC15.8■□□□□ 0.12
USP8P40818 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC15.8■□□□□ 0.12
USP8P40818 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.8■□□□□ 0.12
USP8P40818 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
USP8P40818 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.8■□□□□ 0.12
USP8P40818 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC15.8■□□□□ 0.12
USP8P40818 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC15.8■□□□□ 0.12
USP8P40818 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.8■□□□□ 0.12
USP8P40818 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC15.8■□□□□ 0.12
USP8P40818 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.8■□□□□ 0.12
USP8P40818 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC15.8■□□□□ 0.12
USP8P40818 AC073413.1-201ENST00000603927 732 ntBASIC15.8■□□□□ 0.12
USP8P40818 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
USP8P40818 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
USP8P40818 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
USP8P40818 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
USP8P40818 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.8■□□□□ 0.12
USP8P40818 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
USP8P40818 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.8■□□□□ 0.12
USP8P40818 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
USP8P40818 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
USP8P40818 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
USP8P40818 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC15.8■□□□□ 0.12
USP8P40818 AL591122.2-201ENST00000624125 1853 ntBASIC15.8■□□□□ 0.12
USP8P40818 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms