Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.66■□□□□ 0.26
COL4A5P29400 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL4A5P29400 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL4A5P29400 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
COL4A5P29400 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL4A5P29400 NRADDP-202ENST00000641269 1585 ntBASIC16.66■□□□□ 0.26
COL4A5P29400 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
COL4A5P29400 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL4A5P29400 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC16.65■□□□□ 0.26
COL4A5P29400 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC16.65■□□□□ 0.26
COL4A5P29400 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC16.65■□□□□ 0.26
COL4A5P29400 AC011676.2-201ENST00000518520 584 ntTSL 2 BASIC16.65■□□□□ 0.26
COL4A5P29400 PHBP18-201ENST00000546648 813 ntBASIC16.65■□□□□ 0.26
COL4A5P29400 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC16.65■□□□□ 0.26
COL4A5P29400 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC16.65■□□□□ 0.26
COL4A5P29400 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC16.65■□□□□ 0.26
COL4A5P29400 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC16.65■□□□□ 0.26
COL4A5P29400 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COL4A5P29400 CSAG3-201ENST00000599845 844 ntAPPRIS P5 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL4A5P29400 CSAG2-203ENST00000638741 844 ntAPPRIS P5 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL4A5P29400 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL4A5P29400 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL4A5P29400 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL4A5P29400 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL4A5P29400 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL4A5P29400 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COL4A5P29400 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC16.65■□□□□ 0.26
COL4A5P29400 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COL4A5P29400 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.65■□□□□ 0.26
COL4A5P29400 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.65■□□□□ 0.26
COL4A5P29400 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL4A5P29400 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.65■□□□□ 0.26
COL4A5P29400 IL18BP-201ENST00000260049 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL4A5P29400 PDHB-210ENST00000485460 1397 ntTSL 2 BASIC16.65■□□□□ 0.26
COL4A5P29400 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL4A5P29400 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
COL4A5P29400 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COL4A5P29400 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
COL4A5P29400 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL4A5P29400 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.65■□□□□ 0.26
COL4A5P29400 AL359092.2-201ENST00000423330 585 ntBASIC16.65■□□□□ 0.26
COL4A5P29400 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC16.65■□□□□ 0.26
COL4A5P29400 POLR2LP1-206ENST00000444785 187 ntBASIC16.65■□□□□ 0.26
COL4A5P29400 ISL1-203ENST00000511384 981 ntTSL 5 BASIC16.65■□□□□ 0.26
COL4A5P29400 EMP3-204ENST00000596315 761 ntTSL 2 BASIC16.65■□□□□ 0.26
COL4A5P29400 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COL4A5P29400 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COL4A5P29400 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COL4A5P29400 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
COL4A5P29400 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.65■□□□□ 0.26
COL4A5P29400 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC16.65■□□□□ 0.26
COL4A5P29400 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
COL4A5P29400 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
COL4A5P29400 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.64■□□□□ 0.25
COL4A5P29400 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL4A5P29400 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
COL4A5P29400 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.64■□□□□ 0.25
COL4A5P29400 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
COL4A5P29400 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL4A5P29400 IZUMO1R-201ENST00000328458 798 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
COL4A5P29400 CD37-203ENST00000426897 1204 ntTSL 2 BASIC16.64■□□□□ 0.25
COL4A5P29400 AP000533.1-201ENST00000456143 1177 ntBASIC16.64■□□□□ 0.25
COL4A5P29400 AC008494.1-201ENST00000497612 796 ntBASIC16.64■□□□□ 0.25
COL4A5P29400 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC16.64■□□□□ 0.25
COL4A5P29400 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC16.64■□□□□ 0.25
COL4A5P29400 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC16.64■□□□□ 0.25
COL4A5P29400 PSME2-217ENST00000615264 874 ntTSL 5 BASIC16.64■□□□□ 0.25
COL4A5P29400 ZFAS1-208ENST00000618800 597 ntTSL 3 BASIC16.64■□□□□ 0.25
COL4A5P29400 OAZ3-207ENST00000627780 850 ntTSL 5 BASIC16.64■□□□□ 0.25
COL4A5P29400 PSME2-218ENST00000630027 185 ntTSL 3 BASIC16.64■□□□□ 0.25
COL4A5P29400 OAZ3-209ENST00000635322 745 ntTSL 5 BASIC16.64■□□□□ 0.25
COL4A5P29400 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL4A5P29400 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL4A5P29400 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL4A5P29400 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.64■□□□□ 0.25
COL4A5P29400 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL4A5P29400 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL4A5P29400 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL4A5P29400 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
COL4A5P29400 USP39-207ENST00000450066 2086 ntTSL 2 BASIC16.64■□□□□ 0.25
COL4A5P29400 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC16.64■□□□□ 0.25
COL4A5P29400 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC16.64■□□□□ 0.25
COL4A5P29400 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
COL4A5P29400 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COL4A5P29400 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
COL4A5P29400 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC16.63■□□□□ 0.25
COL4A5P29400 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC16.63■□□□□ 0.25
COL4A5P29400 KRTAP1-5-201ENST00000361883 1177 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
COL4A5P29400 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC16.63■□□□□ 0.25
COL4A5P29400 KRT8P6-201ENST00000399259 1207 ntBASIC16.63■□□□□ 0.25
COL4A5P29400 FTH1P18-201ENST00000412071 549 ntBASIC16.63■□□□□ 0.25
COL4A5P29400 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC16.63■□□□□ 0.25
COL4A5P29400 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC16.63■□□□□ 0.25
COL4A5P29400 RN7SL478P-201ENST00000584358 298 ntBASIC16.63■□□□□ 0.25
COL4A5P29400 RPS5-205ENST00000598495 800 ntTSL 3 BASIC16.63■□□□□ 0.25
COL4A5P29400 AL512324.3-201ENST00000619383 882 ntBASIC16.63■□□□□ 0.25
COL4A5P29400 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
COL4A5P29400 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
COL4A5P29400 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC16.63■□□□□ 0.25
COL4A5P29400 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms