Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.68□□□□□ -0.06
PTPN3P26045 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.68□□□□□ -0.06
PTPN3P26045 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.68□□□□□ -0.06
PTPN3P26045 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.67□□□□□ -0.06
PTPN3P26045 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN3P26045 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN3P26045 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN3P26045 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.67□□□□□ -0.06
PTPN3P26045 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN3P26045 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN3P26045 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN3P26045 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN3P26045 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN3P26045 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.67□□□□□ -0.06
PTPN3P26045 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC14.67□□□□□ -0.06
PTPN3P26045 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN3P26045 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.67□□□□□ -0.06
PTPN3P26045 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN3P26045 AC004899.1-201ENST00000424687 1714 ntBASIC14.67□□□□□ -0.06
PTPN3P26045 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN3P26045 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC14.67□□□□□ -0.06
PTPN3P26045 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
PTPN3P26045 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
PTPN3P26045 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN3P26045 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN3P26045 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN3P26045 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC14.67□□□□□ -0.06
PTPN3P26045 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
PTPN3P26045 GK-202ENST00000378941 458 ntTSL 3 BASIC14.67□□□□□ -0.06
PTPN3P26045 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.67□□□□□ -0.06
PTPN3P26045 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN3P26045 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
PTPN3P26045 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.67□□□□□ -0.06
PTPN3P26045 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.67□□□□□ -0.06
PTPN3P26045 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.67□□□□□ -0.06
PTPN3P26045 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.67□□□□□ -0.06
PTPN3P26045 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.67□□□□□ -0.06
PTPN3P26045 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN3P26045 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.67□□□□□ -0.06
PTPN3P26045 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC14.67□□□□□ -0.06
PTPN3P26045 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.67□□□□□ -0.06
PTPN3P26045 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.67□□□□□ -0.06
PTPN3P26045 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN3P26045 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN3P26045 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN3P26045 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.67□□□□□ -0.06
PTPN3P26045 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN3P26045 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN3P26045 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN3P26045 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.67□□□□□ -0.06
PTPN3P26045 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN3P26045 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN3P26045 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN3P26045 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.67□□□□□ -0.06
PTPN3P26045 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN3P26045 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN3P26045 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
PTPN3P26045 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN3P26045 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
PTPN3P26045 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN3P26045 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PTPN3P26045 AHCYP4-201ENST00000419201 1315 ntBASIC14.66□□□□□ -0.06
PTPN3P26045 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN3P26045 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN3P26045 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
PTPN3P26045 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN3P26045 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN3P26045 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN3P26045 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC14.66□□□□□ -0.06
PTPN3P26045 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.66□□□□□ -0.06
PTPN3P26045 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN3P26045 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN3P26045 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN3P26045 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN3P26045 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.66□□□□□ -0.06
PTPN3P26045 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN3P26045 MAPT-IT1-201ENST00000624111 3016 ntBASIC14.66□□□□□ -0.06
PTPN3P26045 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
PTPN3P26045 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN3P26045 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN3P26045 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
PTPN3P26045 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN3P26045 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.66□□□□□ -0.06
PTPN3P26045 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN3P26045 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN3P26045 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN3P26045 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN3P26045 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN3P26045 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
PTPN3P26045 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN3P26045 XBP1P1-201ENST00000436573 652 ntBASIC14.66□□□□□ -0.06
PTPN3P26045 POM121L10P-201ENST00000436994 1285 ntBASIC14.66□□□□□ -0.06
PTPN3P26045 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
PTPN3P26045 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN3P26045 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN3P26045 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.66□□□□□ -0.06
PTPN3P26045 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC14.66□□□□□ -0.06
PTPN3P26045 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.66□□□□□ -0.06
PTPN3P26045 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.66□□□□□ -0.06
PTPN3P26045 AC104982.3-201ENST00000581995 514 ntBASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms