Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC12.4□□□□□ -0.42
CD40P25942 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CD40P25942 CCT8L1P-201ENST00000465400 1674 ntBASIC12.4□□□□□ -0.42
CD40P25942 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD40P25942 WARS-203ENST00000358655 2466 ntTSL 2 BASIC12.4□□□□□ -0.42
CD40P25942 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD40P25942 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CD40P25942 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
CD40P25942 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD40P25942 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD40P25942 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD40P25942 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD40P25942 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD40P25942 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD40P25942 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CD40P25942 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD40P25942 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.4□□□□□ -0.42
CD40P25942 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CD40P25942 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CD40P25942 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CD40P25942 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC12.4□□□□□ -0.43
CD40P25942 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.43
CD40P25942 MARK2P16-201ENST00000605714 1723 ntBASIC12.4□□□□□ -0.43
CD40P25942 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
CD40P25942 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD40P25942 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.39□□□□□ -0.43
CD40P25942 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD40P25942 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CD40P25942 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD40P25942 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD40P25942 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CD40P25942 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CD40P25942 AC140479.7-201ENST00000636301 2332 ntBASIC12.39□□□□□ -0.43
CD40P25942 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD40P25942 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.39□□□□□ -0.43
CD40P25942 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD40P25942 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.39□□□□□ -0.43
CD40P25942 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CD40P25942 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CD40P25942 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD40P25942 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD40P25942 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC12.39□□□□□ -0.43
CD40P25942 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CD40P25942 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CD40P25942 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD40P25942 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC12.39□□□□□ -0.43
CD40P25942 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD40P25942 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.39□□□□□ -0.43
CD40P25942 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD40P25942 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CD40P25942 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD40P25942 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD40P25942 AL807761.2-201ENST00000422849 729 ntBASIC12.39□□□□□ -0.43
CD40P25942 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC12.39□□□□□ -0.43
CD40P25942 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC12.39□□□□□ -0.43
CD40P25942 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.39□□□□□ -0.43
CD40P25942 TPM1-223ENST00000560445 485 ntTSL 3 BASIC12.39□□□□□ -0.43
CD40P25942 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC12.39□□□□□ -0.43
CD40P25942 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC12.39□□□□□ -0.43
CD40P25942 SIGLEC18P-201ENST00000602271 909 ntBASIC12.39□□□□□ -0.43
CD40P25942 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
CD40P25942 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD40P25942 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.39□□□□□ -0.43
CD40P25942 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CD40P25942 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD40P25942 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD40P25942 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD40P25942 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
CD40P25942 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD40P25942 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
CD40P25942 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CD40P25942 BRD7P5-201ENST00000299197 1822 ntBASIC12.39□□□□□ -0.43
CD40P25942 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CD40P25942 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CD40P25942 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD40P25942 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.39□□□□□ -0.43
CD40P25942 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC12.39□□□□□ -0.43
CD40P25942 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD40P25942 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CD40P25942 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
CD40P25942 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
CD40P25942 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC12.38□□□□□ -0.43
CD40P25942 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
CD40P25942 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CD40P25942 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CD40P25942 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CD40P25942 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC12.38□□□□□ -0.43
CD40P25942 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CD40P25942 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC12.38□□□□□ -0.43
CD40P25942 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CD40P25942 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CD40P25942 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CD40P25942 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.38□□□□□ -0.43
CD40P25942 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC12.38□□□□□ -0.43
CD40P25942 AP001267.2-201ENST00000532619 2086 ntBASIC12.38□□□□□ -0.43
CD40P25942 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CD40P25942 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CD40P25942 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CD40P25942 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CD40P25942 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms