Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 AC004840.1-201ENST00000636359 365 ntBASIC16.5■□□□□ 0.23
TPM2P07951 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
TPM2P07951 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC16.5■□□□□ 0.23
TPM2P07951 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
TPM2P07951 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
TPM2P07951 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TPM2P07951 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
TPM2P07951 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TPM2P07951 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
TPM2P07951 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC16.5■□□□□ 0.23
TPM2P07951 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM2P07951 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM2P07951 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC16.49■□□□□ 0.23
TPM2P07951 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM2P07951 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM2P07951 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM2P07951 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TPM2P07951 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM2P07951 SPACA9-202ENST00000356311 2243 ntTSL 2 BASIC16.49■□□□□ 0.23
TPM2P07951 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC16.49■□□□□ 0.23
TPM2P07951 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
TPM2P07951 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM2P07951 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM2P07951 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM2P07951 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM2P07951 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM2P07951 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.49■□□□□ 0.23
TPM2P07951 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.49■□□□□ 0.23
TPM2P07951 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TPM2P07951 AL139094.1-201ENST00000405549 1188 ntBASIC16.49■□□□□ 0.23
TPM2P07951 AC134915.1-201ENST00000426461 574 ntBASIC16.49■□□□□ 0.23
TPM2P07951 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.49■□□□□ 0.23
TPM2P07951 AC055876.3-201ENST00000431496 288 ntBASIC16.49■□□□□ 0.23
TPM2P07951 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.49■□□□□ 0.23
TPM2P07951 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.49■□□□□ 0.23
TPM2P07951 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM2P07951 AC022616.1-201ENST00000518688 554 ntBASIC16.49■□□□□ 0.23
TPM2P07951 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM2P07951 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TPM2P07951 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.49■□□□□ 0.23
TPM2P07951 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.49■□□□□ 0.23
TPM2P07951 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.49■□□□□ 0.23
TPM2P07951 AC138649.4-201ENST00000612222 287 ntBASIC16.49■□□□□ 0.23
TPM2P07951 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
TPM2P07951 AC099521.2-201ENST00000619354 2036 ntBASIC16.49■□□□□ 0.23
TPM2P07951 AL603764.1-201ENST00000636452 321 ntBASIC16.49■□□□□ 0.23
TPM2P07951 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM2P07951 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TPM2P07951 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM2P07951 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
TPM2P07951 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.49■□□□□ 0.23
TPM2P07951 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
TPM2P07951 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM2P07951 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
TPM2P07951 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC16.49■□□□□ 0.23
TPM2P07951 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM2P07951 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
TPM2P07951 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
TPM2P07951 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM2P07951 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM2P07951 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC16.48■□□□□ 0.23
TPM2P07951 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM2P07951 KRT18P28-201ENST00000453838 1332 ntBASIC16.48■□□□□ 0.23
TPM2P07951 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM2P07951 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM2P07951 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
TPM2P07951 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC16.48■□□□□ 0.23
TPM2P07951 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM2P07951 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM2P07951 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TPM2P07951 KRT8P14-201ENST00000414254 1442 ntBASIC16.48■□□□□ 0.23
TPM2P07951 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM2P07951 AC072061.1-201ENST00000569710 2234 ntBASIC16.48■□□□□ 0.23
TPM2P07951 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.48■□□□□ 0.23
TPM2P07951 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM2P07951 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM2P07951 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TPM2P07951 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TPM2P07951 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM2P07951 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM2P07951 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM2P07951 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM2P07951 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM2P07951 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC16.48■□□□□ 0.23
TPM2P07951 METTL21AP1-201ENST00000438852 635 ntBASIC16.48■□□□□ 0.23
TPM2P07951 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
TPM2P07951 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.48■□□□□ 0.23
TPM2P07951 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.48■□□□□ 0.23
TPM2P07951 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
TPM2P07951 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.48■□□□□ 0.23
TPM2P07951 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.48■□□□□ 0.23
TPM2P07951 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.48■□□□□ 0.23
TPM2P07951 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM2P07951 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.48■□□□□ 0.23
TPM2P07951 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TPM2P07951 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM2P07951 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM2P07951 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM2P07951 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TPM2P07951 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms