Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOA4P06727 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
APOA4P06727 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
APOA4P06727 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.49□□□□□ -0.09
APOA4P06727 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.49□□□□□ -0.09
APOA4P06727 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.49□□□□□ -0.09
APOA4P06727 AC027601.3-201ENST00000622907 509 ntBASIC14.49□□□□□ -0.09
APOA4P06727 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOA4P06727 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
APOA4P06727 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOA4P06727 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
APOA4P06727 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOA4P06727 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOA4P06727 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
APOA4P06727 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.49□□□□□ -0.09
APOA4P06727 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
APOA4P06727 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOA4P06727 AC111170.3-201ENST00000624282 2464 ntBASIC14.49□□□□□ -0.09
APOA4P06727 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
APOA4P06727 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.48□□□□□ -0.09
APOA4P06727 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.48□□□□□ -0.09
APOA4P06727 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APOA4P06727 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOA4P06727 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
APOA4P06727 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC14.48□□□□□ -0.09
APOA4P06727 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APOA4P06727 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOA4P06727 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOA4P06727 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APOA4P06727 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOA4P06727 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
APOA4P06727 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APOA4P06727 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOA4P06727 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOA4P06727 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APOA4P06727 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APOA4P06727 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.48□□□□□ -0.09
APOA4P06727 GK-202ENST00000378941 458 ntTSL 3 BASIC14.48□□□□□ -0.09
APOA4P06727 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
APOA4P06727 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.48□□□□□ -0.09
APOA4P06727 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.48□□□□□ -0.09
APOA4P06727 AC079178.1-201ENST00000420915 656 ntBASIC14.48□□□□□ -0.09
APOA4P06727 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.48□□□□□ -0.09
APOA4P06727 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.48□□□□□ -0.09
APOA4P06727 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APOA4P06727 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.48□□□□□ -0.09
APOA4P06727 AC027237.1-201ENST00000560942 655 ntBASIC14.48□□□□□ -0.09
APOA4P06727 DUX4L45-201ENST00000566406 1057 ntBASIC14.48□□□□□ -0.09
APOA4P06727 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC14.48□□□□□ -0.09
APOA4P06727 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.48□□□□□ -0.09
APOA4P06727 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOA4P06727 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.48□□□□□ -0.09
APOA4P06727 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC14.48□□□□□ -0.09
APOA4P06727 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOA4P06727 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOA4P06727 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOA4P06727 SHC1P1-201ENST00000425230 1745 ntBASIC14.48□□□□□ -0.09
APOA4P06727 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
APOA4P06727 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOA4P06727 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOA4P06727 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOA4P06727 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
APOA4P06727 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOA4P06727 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOA4P06727 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
APOA4P06727 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOA4P06727 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.48□□□□□ -0.09
APOA4P06727 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOA4P06727 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOA4P06727 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOA4P06727 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APOA4P06727 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
APOA4P06727 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APOA4P06727 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
APOA4P06727 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOA4P06727 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
APOA4P06727 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOA4P06727 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOA4P06727 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC14.47□□□□□ -0.09
APOA4P06727 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOA4P06727 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC14.47□□□□□ -0.09
APOA4P06727 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOA4P06727 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
APOA4P06727 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.47□□□□□ -0.09
APOA4P06727 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
APOA4P06727 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOA4P06727 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOA4P06727 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOA4P06727 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
APOA4P06727 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOA4P06727 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
APOA4P06727 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
APOA4P06727 AC010141.1-201ENST00000411585 623 ntBASIC14.47□□□□□ -0.09
APOA4P06727 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.47□□□□□ -0.09
APOA4P06727 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.47□□□□□ -0.09
APOA4P06727 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.47□□□□□ -0.09
APOA4P06727 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.47□□□□□ -0.09
APOA4P06727 AC119751.2-201ENST00000504529 210 ntBASIC14.47□□□□□ -0.09
APOA4P06727 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.47□□□□□ -0.09
APOA4P06727 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms