Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.79■□□□□ 0.12
CD4P01730 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.79■□□□□ 0.12
CD4P01730 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD4P01730 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CD4P01730 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD4P01730 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD4P01730 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD4P01730 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD4P01730 LAP3P2-201ENST00000454686 1454 ntBASIC15.78■□□□□ 0.12
CD4P01730 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD4P01730 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CD4P01730 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
CD4P01730 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD4P01730 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CD4P01730 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CD4P01730 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.78■□□□□ 0.12
CD4P01730 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD4P01730 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
CD4P01730 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD4P01730 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD4P01730 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CD4P01730 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD4P01730 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD4P01730 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD4P01730 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CD4P01730 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CD4P01730 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD4P01730 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CD4P01730 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD4P01730 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CD4P01730 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CD4P01730 PPP1R2P4-201ENST00000424051 595 ntBASIC15.78■□□□□ 0.12
CD4P01730 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC15.78■□□□□ 0.12
CD4P01730 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC15.78■□□□□ 0.12
CD4P01730 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CD4P01730 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC15.78■□□□□ 0.12
CD4P01730 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC15.78■□□□□ 0.12
CD4P01730 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC15.78■□□□□ 0.12
CD4P01730 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CD4P01730 EIF5AP2-201ENST00000585668 1047 ntBASIC15.78■□□□□ 0.12
CD4P01730 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC15.78■□□□□ 0.12
CD4P01730 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CD4P01730 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD4P01730 MIR6746-201ENST00000620971 63 ntBASIC15.78■□□□□ 0.12
CD4P01730 DBET-201ENST00000630918 3363 ntBASIC15.78■□□□□ 0.12
CD4P01730 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD4P01730 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD4P01730 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD4P01730 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD4P01730 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD4P01730 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CD4P01730 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD4P01730 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.78■□□□□ 0.12
CD4P01730 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.78■□□□□ 0.12
CD4P01730 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD4P01730 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD4P01730 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CD4P01730 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD4P01730 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CD4P01730 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD4P01730 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD4P01730 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CD4P01730 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CD4P01730 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CD4P01730 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CD4P01730 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC15.77■□□□□ 0.12
CD4P01730 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CD4P01730 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CD4P01730 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CD4P01730 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.77■□□□□ 0.12
CD4P01730 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CD4P01730 CSAG1-203ENST00000370291 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CD4P01730 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC15.77■□□□□ 0.12
CD4P01730 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
CD4P01730 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CD4P01730 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CD4P01730 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
CD4P01730 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC15.77■□□□□ 0.12
CD4P01730 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CD4P01730 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC15.77■□□□□ 0.12
CD4P01730 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CD4P01730 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC15.77■□□□□ 0.12
CD4P01730 HINT1-205ENST00000508488 703 ntTSL 2 BASIC15.77■□□□□ 0.12
CD4P01730 IGHV1-12-201ENST00000518307 205 ntBASIC15.77■□□□□ 0.12
CD4P01730 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC15.77■□□□□ 0.12
CD4P01730 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC15.77■□□□□ 0.12
CD4P01730 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
CD4P01730 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CD4P01730 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CD4P01730 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CD4P01730 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
CD4P01730 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
CD4P01730 MTHFR-210ENST00000641407 2387 ntBASIC15.77■□□□□ 0.11
CD4P01730 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
CD4P01730 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CD4P01730 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
CD4P01730 AC067931.2-201ENST00000623655 2003 ntBASIC15.77■□□□□ 0.11
CD4P01730 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
CD4P01730 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CD4P01730 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms