Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC12.7□□□□□ -0.38
NPIPB4C9JG80 BNIP3P42-201ENST00000454982 569 ntBASIC12.7□□□□□ -0.38
NPIPB4C9JG80 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC12.7□□□□□ -0.38
NPIPB4C9JG80 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC12.7□□□□□ -0.38
NPIPB4C9JG80 DERL2-202ENST00000570848 657 ntTSL 5 BASIC12.7□□□□□ -0.38
NPIPB4C9JG80 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC12.7□□□□□ -0.38
NPIPB4C9JG80 IFT20-216ENST00000588477 774 ntTSL 5 BASIC12.7□□□□□ -0.38
NPIPB4C9JG80 BNIP3P29-201ENST00000598302 571 ntBASIC12.7□□□□□ -0.38
NPIPB4C9JG80 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC12.7□□□□□ -0.38
NPIPB4C9JG80 AC011447.5-201ENST00000616168 564 ntBASIC12.7□□□□□ -0.38
NPIPB4C9JG80 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC12.7□□□□□ -0.38
NPIPB4C9JG80 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NPIPB4C9JG80 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
NPIPB4C9JG80 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
NPIPB4C9JG80 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NPIPB4C9JG80 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
NPIPB4C9JG80 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
NPIPB4C9JG80 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NPIPB4C9JG80 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC12.7□□□□□ -0.38
NPIPB4C9JG80 DUT-208ENST00000559540 1441 ntTSL 2 BASIC12.7□□□□□ -0.38
NPIPB4C9JG80 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
NPIPB4C9JG80 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC12.7□□□□□ -0.38
NPIPB4C9JG80 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
NPIPB4C9JG80 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 LINC00115-201ENST00000473798 1317 ntBASIC12.69□□□□□ -0.38
NPIPB4C9JG80 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 CSH2-202ENST00000345366 598 ntTSL 5 BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 PTPA-218ENST00000435132 618 ntTSL 2 BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 ATP5G2P4-201ENST00000442175 420 ntBASIC12.69□□□□□ -0.38
NPIPB4C9JG80 MARK2P5-201ENST00000507649 634 ntBASIC12.69□□□□□ -0.38
NPIPB4C9JG80 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 RIT1-205ENST00000539040 919 ntTSL 2 BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 CSH2-206ENST00000560142 749 ntTSL 5 BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 AC013355.1-201ENST00000562625 723 ntBASIC12.69□□□□□ -0.38
NPIPB4C9JG80 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 SYT17-208ENST00000568433 812 ntTSL 3 BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 AC104982.3-201ENST00000581995 514 ntBASIC12.69□□□□□ -0.38
NPIPB4C9JG80 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 ABCD1P2-201ENST00000429313 1601 ntBASIC12.69□□□□□ -0.38
NPIPB4C9JG80 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
NPIPB4C9JG80 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPB4C9JG80 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
NPIPB4C9JG80 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
NPIPB4C9JG80 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
NPIPB4C9JG80 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.68□□□□□ -0.38
NPIPB4C9JG80 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPB4C9JG80 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.68□□□□□ -0.38
NPIPB4C9JG80 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPB4C9JG80 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPB4C9JG80 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPB4C9JG80 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPB4C9JG80 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
NPIPB4C9JG80 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms