Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 MVK-217ENST00000639206 367 ntTSL 5 BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
HLA-DRB4X5D2U9 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 AMT-221ENST00000538581 2038 ntTSL 2 BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 TP73-207ENST00000378290 1831 ntTSL 2 BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 RGS5-214ENST00000429865 754 ntTSL 3 BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 U91328.1-201ENST00000437528 223 ntBASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 AL035414.1-201ENST00000451327 857 ntBASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 HOMER2P2-201ENST00000451621 847 ntBASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 AC104989.1-201ENST00000519711 778 ntBASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 C2orf69P2-201ENST00000562032 1123 ntBASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 MIR4683-201ENST00000579659 81 ntBASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 PPY2P-201ENST00000582808 702 ntBASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 RPS24-214ENST00000613865 538 ntTSL 5 BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 AC008687.7-202ENST00000637404 953 ntBASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 KHSRPP1-201ENST00000427983 1768 ntBASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 AL139385.1-201ENST00000611744 3272 ntBASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
HLA-DRB4X5D2U9 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
HLA-DRB4X5D2U9 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms