Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 ARHGAP25-203ENST00000409220 2939 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 AC020763.3-201ENST00000625095 2904 ntBASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 MED29-201ENST00000315588 3653 ntAPPRIS P2 TSL 1 (best) BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 ZC3HC1-202ENST00000358303 1972 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 KLF4-206ENST00000610832 1956 ntTSL 5 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 PDLIM5-210ENST00000508216 1794 ntTSL 2 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 AL449403.1-201ENST00000432783 1577 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 CLPB-201ENST00000294053 3240 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 LRRC32-203ENST00000407242 4311 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 FN1-206ENST00000359671 8524 ntTSL 5 BASIC7.33□□□□□ -1.24
LINC01558Q9Y6Z2 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 AP003355.2-201ENST00000605923 2622 ntBASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 DGKH-202ENST00000337343 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 MASP2-201ENST00000400897 2439 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 FAM78A-202ENST00000372269 3659 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 PKM-222ENST00000568883 1863 ntTSL 5 BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 PPFIA2-214ENST00000549325 4727 ntTSL 5 BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 GEMIN4-207ENST00000576778 4729 ntBASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 PAX6-208ENST00000379132 2576 ntAPPRIS ALT1 TSL 5 BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 DYNC1I1-205ENST00000447467 2947 ntAPPRIS ALT1 TSL 1 (best) BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 BACH2-210ENST00000537989 9108 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 PLEC-210ENST00000527096 13713 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 WASH2P-201ENST00000453662 1684 ntBASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 C19orf44-201ENST00000221671 3427 ntAPPRIS P3 TSL 2 BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 LANCL1-207ENST00000450366 4602 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 SEPT9-205ENST00000427674 3937 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 STAT6-203ENST00000537215 2886 ntTSL 2 BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 ARHGEF9-218ENST00000624843 2154 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 TRAF5-203ENST00000367004 1827 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 RHD-210ENST00000622561 3007 ntTSL 5 BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 EPB41L1-203ENST00000373941 2652 ntAPPRIS ALT1 TSL 5 BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 ST5-230ENST00000530438 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 PLK4-203ENST00000507249 3195 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 POLR3E-201ENST00000299853 3697 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 AP3S2-201ENST00000336418 5891 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 PTK7-204ENST00000349241 3801 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 AL356441.2-201ENST00000443009 864 ntBASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 MEG3-211ENST00000452514 461 ntTSL 3 BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 UNC93B5-201ENST00000530315 699 ntBASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 QPRT-203ENST00000562473 579 ntTSL 3 BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 AC092364.2-202ENST00000597012 1073 ntBASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 COPE-211ENST00000600932 1144 ntTSL 5 BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 AP001412.1-201ENST00000608405 714 ntBASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 CR392039.2-201ENST00000623182 509 ntBASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 NR2E1-201ENST00000368983 2612 ntTSL 2 BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 EPHB4-202ENST00000360620 3789 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 BTD-201ENST00000303498 2075 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 MPP7-202ENST00000375719 2090 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 RAD52-204ENST00000430095 2366 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 PAFAH1B2-204ENST00000527958 4198 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 PXN-204ENST00000424649 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 LONRF2-201ENST00000393437 13912 ntAPPRIS P2 TSL 5 BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 RHBDL3-203ENST00000536287 4470 ntTSL 2 BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 ZAN-207ENST00000620596 8396 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 CCT8-201ENST00000286788 2005 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 CACNA2D2-206ENST00000479441 3453 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 ABCF2-201ENST00000222388 2185 ntTSL 5 BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 SLC6A6-210ENST00000622186 6528 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 LPGAT1-202ENST00000366997 7782 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 C14orf159-234ENST00000525393 2471 ntTSL 5 BASIC7.32□□□□□ -1.24
LINC01558Q9Y6Z2 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms