Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.11□□□□□ -0.15
RNF11Q9Y3C5 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
RNF11Q9Y3C5 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.11□□□□□ -0.15
RNF11Q9Y3C5 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RNF11Q9Y3C5 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.11□□□□□ -0.15
RNF11Q9Y3C5 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.11□□□□□ -0.15
RNF11Q9Y3C5 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.11□□□□□ -0.15
RNF11Q9Y3C5 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.11□□□□□ -0.15
RNF11Q9Y3C5 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.11□□□□□ -0.15
RNF11Q9Y3C5 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.11□□□□□ -0.15
RNF11Q9Y3C5 AL161932.2-201ENST00000435436 679 ntBASIC14.11□□□□□ -0.15
RNF11Q9Y3C5 CHMP1AP1-201ENST00000445563 662 ntBASIC14.11□□□□□ -0.15
RNF11Q9Y3C5 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.11□□□□□ -0.15
RNF11Q9Y3C5 AL035414.1-201ENST00000451327 857 ntBASIC14.11□□□□□ -0.15
RNF11Q9Y3C5 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
RNF11Q9Y3C5 PFN2-215ENST00000497148 743 ntTSL 4 BASIC14.11□□□□□ -0.15
RNF11Q9Y3C5 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC14.11□□□□□ -0.15
RNF11Q9Y3C5 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.11□□□□□ -0.15
RNF11Q9Y3C5 C2orf69P2-201ENST00000562032 1123 ntBASIC14.11□□□□□ -0.15
RNF11Q9Y3C5 AC005586.2-201ENST00000563946 837 ntBASIC14.11□□□□□ -0.15
RNF11Q9Y3C5 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.11□□□□□ -0.15
RNF11Q9Y3C5 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.11□□□□□ -0.15
RNF11Q9Y3C5 AC008825.2-201ENST00000603374 718 ntBASIC14.11□□□□□ -0.15
RNF11Q9Y3C5 ZACNP1-201ENST00000612259 710 ntBASIC14.11□□□□□ -0.15
RNF11Q9Y3C5 AL136301.1-201ENST00000615830 422 ntBASIC14.11□□□□□ -0.15
RNF11Q9Y3C5 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.11□□□□□ -0.15
RNF11Q9Y3C5 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF11Q9Y3C5 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.11□□□□□ -0.15
RNF11Q9Y3C5 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
RNF11Q9Y3C5 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC14.11□□□□□ -0.15
RNF11Q9Y3C5 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RNF11Q9Y3C5 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
RNF11Q9Y3C5 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC14.11□□□□□ -0.15
RNF11Q9Y3C5 AHCYP2-201ENST00000430630 1300 ntBASIC14.11□□□□□ -0.15
RNF11Q9Y3C5 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RNF11Q9Y3C5 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.11□□□□□ -0.15
RNF11Q9Y3C5 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.11□□□□□ -0.15
RNF11Q9Y3C5 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.11□□□□□ -0.15
RNF11Q9Y3C5 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC14.11□□□□□ -0.15
RNF11Q9Y3C5 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
RNF11Q9Y3C5 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 AL118506.1-201ENST00000601296 3082 ntBASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 KRT17P7-201ENST00000451704 1104 ntBASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 RHOXF1P1-202ENST00000635473 501 ntBASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 AC105233.6-201ENST00000642093 218 ntBASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 PDIA3P1-201ENST00000471856 1510 ntBASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RNF11Q9Y3C5 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RNF11Q9Y3C5 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
RNF11Q9Y3C5 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RNF11Q9Y3C5 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RNF11Q9Y3C5 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
RNF11Q9Y3C5 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
RNF11Q9Y3C5 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RNF11Q9Y3C5 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RNF11Q9Y3C5 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
RNF11Q9Y3C5 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms