Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF304Q9HCX3 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
ZNF304Q9HCX3 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ZNF304Q9HCX3 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC13.77□□□□□ -0.2
ZNF304Q9HCX3 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ZNF304Q9HCX3 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.77□□□□□ -0.2
ZNF304Q9HCX3 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC13.77□□□□□ -0.2
ZNF304Q9HCX3 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
ZNF304Q9HCX3 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
ZNF304Q9HCX3 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
ZNF304Q9HCX3 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF304Q9HCX3 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF304Q9HCX3 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF304Q9HCX3 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF304Q9HCX3 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF304Q9HCX3 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF304Q9HCX3 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF304Q9HCX3 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF304Q9HCX3 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF304Q9HCX3 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
ZNF304Q9HCX3 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
ZNF304Q9HCX3 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF304Q9HCX3 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.77□□□□□ -0.21
ZNF304Q9HCX3 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.77□□□□□ -0.21
ZNF304Q9HCX3 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF304Q9HCX3 AHCYP4-201ENST00000419201 1315 ntBASIC13.77□□□□□ -0.21
ZNF304Q9HCX3 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC13.77□□□□□ -0.21
ZNF304Q9HCX3 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF304Q9HCX3 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF304Q9HCX3 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF304Q9HCX3 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.77□□□□□ -0.21
ZNF304Q9HCX3 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF304Q9HCX3 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF304Q9HCX3 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC13.77□□□□□ -0.21
ZNF304Q9HCX3 RERG-205ENST00000537647 935 ntTSL 2 BASIC13.77□□□□□ -0.21
ZNF304Q9HCX3 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.77□□□□□ -0.21
ZNF304Q9HCX3 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC13.77□□□□□ -0.21
ZNF304Q9HCX3 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF304Q9HCX3 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC13.77□□□□□ -0.21
ZNF304Q9HCX3 MIR3619-201ENST00000579667 83 ntBASIC13.77□□□□□ -0.21
ZNF304Q9HCX3 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
ZNF304Q9HCX3 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC13.77□□□□□ -0.21
ZNF304Q9HCX3 CU633904.3-201ENST00000624042 1029 ntBASIC13.77□□□□□ -0.21
ZNF304Q9HCX3 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC13.77□□□□□ -0.21
ZNF304Q9HCX3 INTS4P1-203ENST00000641008 3683 ntBASIC13.77□□□□□ -0.21
ZNF304Q9HCX3 AC138627.1-207ENST00000641560 1006 ntBASIC13.77□□□□□ -0.21
ZNF304Q9HCX3 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
ZNF304Q9HCX3 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF304Q9HCX3 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF304Q9HCX3 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF304Q9HCX3 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF304Q9HCX3 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF304Q9HCX3 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF304Q9HCX3 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ZNF304Q9HCX3 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.76□□□□□ -0.21
ZNF304Q9HCX3 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF304Q9HCX3 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF304Q9HCX3 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF304Q9HCX3 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF304Q9HCX3 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
ZNF304Q9HCX3 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF304Q9HCX3 AC067750.1-201ENST00000608826 6545 ntBASIC13.76□□□□□ -0.21
ZNF304Q9HCX3 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF304Q9HCX3 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.76□□□□□ -0.21
ZNF304Q9HCX3 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.76□□□□□ -0.21
ZNF304Q9HCX3 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
ZNF304Q9HCX3 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF304Q9HCX3 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF304Q9HCX3 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
ZNF304Q9HCX3 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF304Q9HCX3 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.76□□□□□ -0.21
ZNF304Q9HCX3 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF304Q9HCX3 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF304Q9HCX3 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.76□□□□□ -0.21
ZNF304Q9HCX3 ACTG1P2-201ENST00000415776 1125 ntBASIC13.76□□□□□ -0.21
ZNF304Q9HCX3 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC13.76□□□□□ -0.21
ZNF304Q9HCX3 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC13.76□□□□□ -0.21
ZNF304Q9HCX3 ACTG1P11-201ENST00000425411 1125 ntBASIC13.76□□□□□ -0.21
ZNF304Q9HCX3 XBP1P1-201ENST00000436573 652 ntBASIC13.76□□□□□ -0.21
ZNF304Q9HCX3 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF304Q9HCX3 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC13.76□□□□□ -0.21
ZNF304Q9HCX3 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13.76□□□□□ -0.21
ZNF304Q9HCX3 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF304Q9HCX3 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.76□□□□□ -0.21
ZNF304Q9HCX3 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC13.76□□□□□ -0.21
ZNF304Q9HCX3 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.76□□□□□ -0.21
ZNF304Q9HCX3 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
ZNF304Q9HCX3 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
ZNF304Q9HCX3 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
ZNF304Q9HCX3 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.76□□□□□ -0.21
ZNF304Q9HCX3 AL021578.1-201ENST00000613646 709 ntBASIC13.76□□□□□ -0.21
ZNF304Q9HCX3 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
ZNF304Q9HCX3 AC092299.1-201ENST00000632679 757 ntBASIC13.76□□□□□ -0.21
ZNF304Q9HCX3 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC13.76□□□□□ -0.21
ZNF304Q9HCX3 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF304Q9HCX3 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF304Q9HCX3 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC13.76□□□□□ -0.21
ZNF304Q9HCX3 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ZNF304Q9HCX3 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
ZNF304Q9HCX3 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms