Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CD248Q9HCU0 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD248Q9HCU0 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.28■□□□□ 0.04
CD248Q9HCU0 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CD248Q9HCU0 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD248Q9HCU0 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD248Q9HCU0 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD248Q9HCU0 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC15.28■□□□□ 0.04
CD248Q9HCU0 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD248Q9HCU0 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CD248Q9HCU0 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.28■□□□□ 0.04
CD248Q9HCU0 KRT8P4-201ENST00000509735 1454 ntBASIC15.28■□□□□ 0.04
CD248Q9HCU0 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC15.28■□□□□ 0.04
CD248Q9HCU0 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD248Q9HCU0 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD248Q9HCU0 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD248Q9HCU0 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CD248Q9HCU0 AL354877.1-201ENST00000424412 413 ntBASIC15.28■□□□□ 0.04
CD248Q9HCU0 NKAIN1P1-201ENST00000435754 582 ntBASIC15.28■□□□□ 0.04
CD248Q9HCU0 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.28■□□□□ 0.04
CD248Q9HCU0 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD248Q9HCU0 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.28■□□□□ 0.04
CD248Q9HCU0 AC100850.1-201ENST00000506768 649 ntBASIC15.28■□□□□ 0.04
CD248Q9HCU0 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC15.28■□□□□ 0.04
CD248Q9HCU0 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC15.28■□□□□ 0.04
CD248Q9HCU0 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.28■□□□□ 0.04
CD248Q9HCU0 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CD248Q9HCU0 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD248Q9HCU0 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD248Q9HCU0 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD248Q9HCU0 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD248Q9HCU0 AC055811.4-201ENST00000624039 1754 ntBASIC15.28■□□□□ 0.04
CD248Q9HCU0 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC15.28■□□□□ 0.04
CD248Q9HCU0 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD248Q9HCU0 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC15.28■□□□□ 0.04
CD248Q9HCU0 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD248Q9HCU0 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CD248Q9HCU0 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD248Q9HCU0 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD248Q9HCU0 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD248Q9HCU0 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
CD248Q9HCU0 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CD248Q9HCU0 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
CD248Q9HCU0 AMT-221ENST00000538581 2038 ntTSL 2 BASIC15.27■□□□□ 0.04
CD248Q9HCU0 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CD248Q9HCU0 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC15.27■□□□□ 0.04
CD248Q9HCU0 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CD248Q9HCU0 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CD248Q9HCU0 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CD248Q9HCU0 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CD248Q9HCU0 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CD248Q9HCU0 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CD248Q9HCU0 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CD248Q9HCU0 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CD248Q9HCU0 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CD248Q9HCU0 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
CD248Q9HCU0 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CD248Q9HCU0 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CD248Q9HCU0 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CD248Q9HCU0 CES1P1-201ENST00000421606 1704 ntBASIC15.27■□□□□ 0.04
CD248Q9HCU0 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CD248Q9HCU0 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CD248Q9HCU0 AL136309.1-201ENST00000403917 691 ntBASIC15.27■□□□□ 0.04
CD248Q9HCU0 TSACC-208ENST00000481479 741 ntTSL 2 BASIC15.27■□□□□ 0.04
CD248Q9HCU0 AC044849.1-201ENST00000519737 1188 ntBASIC15.27■□□□□ 0.04
CD248Q9HCU0 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC15.27■□□□□ 0.04
CD248Q9HCU0 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC15.27■□□□□ 0.04
CD248Q9HCU0 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.27■□□□□ 0.04
CD248Q9HCU0 AC007663.3-201ENST00000609632 465 ntBASIC15.27■□□□□ 0.04
CD248Q9HCU0 AC022748.3-201ENST00000621828 275 ntBASIC15.27■□□□□ 0.04
CD248Q9HCU0 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CD248Q9HCU0 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CD248Q9HCU0 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CD248Q9HCU0 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CD248Q9HCU0 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CD248Q9HCU0 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CD248Q9HCU0 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC15.27■□□□□ 0.03
CD248Q9HCU0 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CD248Q9HCU0 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
CD248Q9HCU0 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CD248Q9HCU0 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CD248Q9HCU0 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CD248Q9HCU0 TSN-212ENST00000536142 3328 ntTSL 2 BASIC15.27■□□□□ 0.03
CD248Q9HCU0 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CD248Q9HCU0 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
CD248Q9HCU0 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CD248Q9HCU0 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
CD248Q9HCU0 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.26■□□□□ 0.03
CD248Q9HCU0 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD248Q9HCU0 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CD248Q9HCU0 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CD248Q9HCU0 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC15.26■□□□□ 0.03
CD248Q9HCU0 BEND3P3-201ENST00000611030 2440 ntBASIC15.26■□□□□ 0.03
CD248Q9HCU0 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC15.26■□□□□ 0.03
CD248Q9HCU0 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC15.26■□□□□ 0.03
CD248Q9HCU0 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CD248Q9HCU0 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CD248Q9HCU0 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CD248Q9HCU0 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CD248Q9HCU0 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms