Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AC092810.2-201ENST00000431570 362 ntBASIC12.99□□□□□ -0.33
CHD8Q9HCK8 EEF1DP2-201ENST00000433698 843 ntBASIC12.99□□□□□ -0.33
CHD8Q9HCK8 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 TRAPPC4-212ENST00000533058 1209 ntTSL 2 BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 DDX11L8-201ENST00000535849 366 ntBASIC12.99□□□□□ -0.33
CHD8Q9HCK8 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 AL132780.2-203ENST00000555294 589 ntTSL 4 BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 MED11-203ENST00000575284 652 ntTSL 3 BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 PDLIM2-218ENST00000614502 599 ntTSL 2 BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 AP002414.2-201ENST00000591780 3365 ntBASIC12.99□□□□□ -0.33
CHD8Q9HCK8 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 IGHV1OR15-9-201ENST00000338912 353 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 LINC00685-201ENST00000391707 428 ntTSL 5 BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 NOS2P3-201ENST00000411468 867 ntBASIC12.98□□□□□ -0.33
CHD8Q9HCK8 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 NOS2P2-201ENST00000426269 867 ntBASIC12.98□□□□□ -0.33
CHD8Q9HCK8 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 AC010086.2-201ENST00000428616 226 ntBASIC12.98□□□□□ -0.33
CHD8Q9HCK8 AC079742.1-201ENST00000434951 357 ntTSL 3 BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 RPS15P5-201ENST00000449885 432 ntBASIC12.98□□□□□ -0.33
CHD8Q9HCK8 AC015818.1-201ENST00000451011 244 ntBASIC12.98□□□□□ -0.33
CHD8Q9HCK8 OARD1-214ENST00000486443 764 ntTSL 3 BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 IFI27L1-205ENST00000554544 406 ntTSL 3 BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 MAX-218ENST00000557746 571 ntTSL 4 BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 DNM1P50-201ENST00000565767 508 ntBASIC12.98□□□□□ -0.33
CHD8Q9HCK8 Z69706.1-201ENST00000595428 547 ntBASIC12.98□□□□□ -0.33
CHD8Q9HCK8 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 NLK-203ENST00000582037 1503 ntTSL 2 BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 GPI-205ENST00000586425 1799 ntTSL 5 BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 MT-ND6-201ENST00000361681 525 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 PRDX3P2-201ENST00000447051 611 ntBASIC12.98□□□□□ -0.33
CHD8Q9HCK8 HAND2-AS1-208ENST00000504740 837 ntTSL 3 BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 AC132825.4-202ENST00000578792 434 ntBASIC12.98□□□□□ -0.33
CHD8Q9HCK8 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 PUF60-204ENST00000456095 1736 ntTSL 5 BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CHD8Q9HCK8 AL356583.1-201ENST00000398739 1371 ntBASIC12.98□□□□□ -0.33
CHD8Q9HCK8 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 CMTM5-204ENST00000382809 378 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 AC253536.1-201ENST00000437021 315 ntBASIC12.97□□□□□ -0.33
CHD8Q9HCK8 RPSAP16-201ENST00000447583 821 ntBASIC12.97□□□□□ -0.33
CHD8Q9HCK8 AL583804.1-201ENST00000448643 810 ntTSL 3 BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 AC093627.3-201ENST00000467050 574 ntTSL 4 BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 CMC2-204ENST00000562713 573 ntTSL 3 BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 CMC2-209ENST00000565108 399 ntTSL 2 BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 AC133555.4-201ENST00000569081 152 ntBASIC12.97□□□□□ -0.33
CHD8Q9HCK8 PSMG3-AS1-207ENST00000612019 586 ntTSL 4 BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 MGST3-214ENST00000627653 1130 ntTSL 5 BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC12.97□□□□□ -0.33
CHD8Q9HCK8 LINC01137-201ENST00000424989 1395 ntTSL 2 BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms