Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VAT1LQ9HCJ6 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VAT1LQ9HCJ6 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.69■□□□□ 0.26
VAT1LQ9HCJ6 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC16.69■□□□□ 0.26
VAT1LQ9HCJ6 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
VAT1LQ9HCJ6 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC16.69■□□□□ 0.26
VAT1LQ9HCJ6 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC16.69■□□□□ 0.26
VAT1LQ9HCJ6 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC16.69■□□□□ 0.26
VAT1LQ9HCJ6 AC134698.3-201ENST00000523880 214 ntBASIC16.69■□□□□ 0.26
VAT1LQ9HCJ6 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
VAT1LQ9HCJ6 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC16.69■□□□□ 0.26
VAT1LQ9HCJ6 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC16.69■□□□□ 0.26
VAT1LQ9HCJ6 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC16.69■□□□□ 0.26
VAT1LQ9HCJ6 AC012044.1-201ENST00000603431 297 ntBASIC16.69■□□□□ 0.26
VAT1LQ9HCJ6 MEG3_2.1-201ENST00000611456 105 ntBASIC16.69■□□□□ 0.26
VAT1LQ9HCJ6 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC16.69■□□□□ 0.26
VAT1LQ9HCJ6 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC16.69■□□□□ 0.26
VAT1LQ9HCJ6 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VAT1LQ9HCJ6 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VAT1LQ9HCJ6 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VAT1LQ9HCJ6 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
VAT1LQ9HCJ6 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
VAT1LQ9HCJ6 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
VAT1LQ9HCJ6 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VAT1LQ9HCJ6 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.69■□□□□ 0.26
VAT1LQ9HCJ6 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
VAT1LQ9HCJ6 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VAT1LQ9HCJ6 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC16.69■□□□□ 0.26
VAT1LQ9HCJ6 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
VAT1LQ9HCJ6 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
VAT1LQ9HCJ6 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC16.69■□□□□ 0.26
VAT1LQ9HCJ6 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC16.69■□□□□ 0.26
VAT1LQ9HCJ6 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC16.69■□□□□ 0.26
VAT1LQ9HCJ6 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
VAT1LQ9HCJ6 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC16.69■□□□□ 0.26
VAT1LQ9HCJ6 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC16.69■□□□□ 0.26
VAT1LQ9HCJ6 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC16.69■□□□□ 0.26
VAT1LQ9HCJ6 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VAT1LQ9HCJ6 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VAT1LQ9HCJ6 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VAT1LQ9HCJ6 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
VAT1LQ9HCJ6 AC023908.3-201ENST00000564211 3047 ntBASIC16.68■□□□□ 0.26
VAT1LQ9HCJ6 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VAT1LQ9HCJ6 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VAT1LQ9HCJ6 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VAT1LQ9HCJ6 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VAT1LQ9HCJ6 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VAT1LQ9HCJ6 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VAT1LQ9HCJ6 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VAT1LQ9HCJ6 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VAT1LQ9HCJ6 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC16.68■□□□□ 0.26
VAT1LQ9HCJ6 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VAT1LQ9HCJ6 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VAT1LQ9HCJ6 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
VAT1LQ9HCJ6 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC16.68■□□□□ 0.26
VAT1LQ9HCJ6 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC16.68■□□□□ 0.26
VAT1LQ9HCJ6 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC16.68■□□□□ 0.26
VAT1LQ9HCJ6 RN7SL277P-201ENST00000481521 288 ntBASIC16.68■□□□□ 0.26
VAT1LQ9HCJ6 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VAT1LQ9HCJ6 RHOQP1-201ENST00000555758 579 ntBASIC16.68■□□□□ 0.26
VAT1LQ9HCJ6 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VAT1LQ9HCJ6 AC105129.2-201ENST00000559536 390 ntBASIC16.68■□□□□ 0.26
VAT1LQ9HCJ6 AC140658.4-201ENST00000561990 352 ntBASIC16.68■□□□□ 0.26
VAT1LQ9HCJ6 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.68■□□□□ 0.26
VAT1LQ9HCJ6 AL133499.1-201ENST00000596207 608 ntBASIC16.68■□□□□ 0.26
VAT1LQ9HCJ6 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC16.68■□□□□ 0.26
VAT1LQ9HCJ6 AC090386.2-201ENST00000623010 1039 ntBASIC16.68■□□□□ 0.26
VAT1LQ9HCJ6 CDK7-214ENST00000626796 358 ntTSL 5 BASIC16.68■□□□□ 0.26
VAT1LQ9HCJ6 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC16.68■□□□□ 0.26
VAT1LQ9HCJ6 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VAT1LQ9HCJ6 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VAT1LQ9HCJ6 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
VAT1LQ9HCJ6 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
VAT1LQ9HCJ6 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.68■□□□□ 0.26
VAT1LQ9HCJ6 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
VAT1LQ9HCJ6 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VAT1LQ9HCJ6 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
VAT1LQ9HCJ6 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.68■□□□□ 0.26
VAT1LQ9HCJ6 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
VAT1LQ9HCJ6 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
VAT1LQ9HCJ6 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
VAT1LQ9HCJ6 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VAT1LQ9HCJ6 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC16.67■□□□□ 0.26
VAT1LQ9HCJ6 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VAT1LQ9HCJ6 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
VAT1LQ9HCJ6 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC16.67■□□□□ 0.26
VAT1LQ9HCJ6 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
VAT1LQ9HCJ6 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VAT1LQ9HCJ6 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VAT1LQ9HCJ6 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VAT1LQ9HCJ6 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
VAT1LQ9HCJ6 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
VAT1LQ9HCJ6 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VAT1LQ9HCJ6 JTB-202ENST00000356648 1040 ntTSL 2 BASIC16.67■□□□□ 0.26
VAT1LQ9HCJ6 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
VAT1LQ9HCJ6 ELK2AP-201ENST00000392510 1007 ntBASIC16.67■□□□□ 0.26
VAT1LQ9HCJ6 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC16.67■□□□□ 0.26
VAT1LQ9HCJ6 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC16.67■□□□□ 0.26
VAT1LQ9HCJ6 DUX4L50-201ENST00000455245 715 ntBASIC16.67■□□□□ 0.26
VAT1LQ9HCJ6 RN7SL769P-201ENST00000469386 295 ntBASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms