Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UPF2Q9HAU5 SPDYE19P-201ENST00000338590 713 ntBASIC17.78■□□□□ 0.44
UPF2Q9HAU5 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPF2Q9HAU5 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UPF2Q9HAU5 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.78■□□□□ 0.44
UPF2Q9HAU5 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC17.78■□□□□ 0.44
UPF2Q9HAU5 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.78■□□□□ 0.44
UPF2Q9HAU5 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC17.78■□□□□ 0.44
UPF2Q9HAU5 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.78■□□□□ 0.44
UPF2Q9HAU5 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.78■□□□□ 0.44
UPF2Q9HAU5 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.78■□□□□ 0.44
UPF2Q9HAU5 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.78■□□□□ 0.44
UPF2Q9HAU5 AC008761.3-201ENST00000624803 892 ntBASIC17.78■□□□□ 0.44
UPF2Q9HAU5 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
UPF2Q9HAU5 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC17.78■□□□□ 0.44
UPF2Q9HAU5 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPF2Q9HAU5 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPF2Q9HAU5 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC17.78■□□□□ 0.44
UPF2Q9HAU5 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
UPF2Q9HAU5 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
UPF2Q9HAU5 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.78■□□□□ 0.44
UPF2Q9HAU5 AL445209.1-201ENST00000607269 3491 ntBASIC17.78■□□□□ 0.44
UPF2Q9HAU5 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC17.78■□□□□ 0.44
UPF2Q9HAU5 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC17.78■□□□□ 0.44
UPF2Q9HAU5 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
UPF2Q9HAU5 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UPF2Q9HAU5 AL022313.4-201ENST00000562756 2046 ntBASIC17.77■□□□□ 0.44
UPF2Q9HAU5 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
UPF2Q9HAU5 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UPF2Q9HAU5 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
UPF2Q9HAU5 LINC02486-201ENST00000604157 3000 ntBASIC17.77■□□□□ 0.44
UPF2Q9HAU5 STK3-218ENST00000617590 2485 ntTSL 5 BASIC17.77■□□□□ 0.44
UPF2Q9HAU5 AC135782.3-201ENST00000562782 2105 ntBASIC17.77■□□□□ 0.44
UPF2Q9HAU5 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UPF2Q9HAU5 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UPF2Q9HAU5 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
UPF2Q9HAU5 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
UPF2Q9HAU5 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UPF2Q9HAU5 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.77■□□□□ 0.44
UPF2Q9HAU5 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.77■□□□□ 0.44
UPF2Q9HAU5 AC027237.1-201ENST00000560942 655 ntBASIC17.77■□□□□ 0.44
UPF2Q9HAU5 AC005586.2-201ENST00000563946 837 ntBASIC17.77■□□□□ 0.44
UPF2Q9HAU5 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC17.77■□□□□ 0.44
UPF2Q9HAU5 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC17.77■□□□□ 0.44
UPF2Q9HAU5 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
UPF2Q9HAU5 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC17.77■□□□□ 0.44
UPF2Q9HAU5 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
UPF2Q9HAU5 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
UPF2Q9HAU5 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
UPF2Q9HAU5 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
UPF2Q9HAU5 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
UPF2Q9HAU5 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
UPF2Q9HAU5 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPF2Q9HAU5 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC17.76■□□□□ 0.43
UPF2Q9HAU5 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
UPF2Q9HAU5 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
UPF2Q9HAU5 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPF2Q9HAU5 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPF2Q9HAU5 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
UPF2Q9HAU5 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPF2Q9HAU5 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
UPF2Q9HAU5 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPF2Q9HAU5 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
UPF2Q9HAU5 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC17.76■□□□□ 0.43
UPF2Q9HAU5 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPF2Q9HAU5 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPF2Q9HAU5 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.76■□□□□ 0.43
UPF2Q9HAU5 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.76■□□□□ 0.43
UPF2Q9HAU5 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.76■□□□□ 0.43
UPF2Q9HAU5 PUDPP3-201ENST00000445368 636 ntBASIC17.76■□□□□ 0.43
UPF2Q9HAU5 AL512638.1-201ENST00000457493 794 ntBASIC17.76■□□□□ 0.43
UPF2Q9HAU5 ALG3P1-201ENST00000508806 1114 ntBASIC17.76■□□□□ 0.43
UPF2Q9HAU5 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPF2Q9HAU5 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.76■□□□□ 0.43
UPF2Q9HAU5 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
UPF2Q9HAU5 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.76■□□□□ 0.43
UPF2Q9HAU5 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPF2Q9HAU5 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC17.76■□□□□ 0.43
UPF2Q9HAU5 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPF2Q9HAU5 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPF2Q9HAU5 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPF2Q9HAU5 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
UPF2Q9HAU5 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UPF2Q9HAU5 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPF2Q9HAU5 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPF2Q9HAU5 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC17.76■□□□□ 0.43
UPF2Q9HAU5 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
UPF2Q9HAU5 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC17.76■□□□□ 0.43
UPF2Q9HAU5 STK25-235ENST00000543554 2556 ntTSL 2 BASIC17.76■□□□□ 0.43
UPF2Q9HAU5 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
UPF2Q9HAU5 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC17.76■□□□□ 0.43
UPF2Q9HAU5 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UPF2Q9HAU5 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
UPF2Q9HAU5 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC17.75■□□□□ 0.43
UPF2Q9HAU5 AC020910.5-201ENST00000623668 1865 ntBASIC17.75■□□□□ 0.43
UPF2Q9HAU5 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC17.75■□□□□ 0.43
UPF2Q9HAU5 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC17.75■□□□□ 0.43
UPF2Q9HAU5 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
UPF2Q9HAU5 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
UPF2Q9HAU5 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms