Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTFDC1Q9BY42 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.18■□□□□ 0.34
RTFDC1Q9BY42 MYB-242ENST00000618728 3545 ntTSL 5 BASIC17.18■□□□□ 0.34
RTFDC1Q9BY42 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RTFDC1Q9BY42 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTFDC1Q9BY42 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC17.18■□□□□ 0.34
RTFDC1Q9BY42 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTFDC1Q9BY42 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTFDC1Q9BY42 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTFDC1Q9BY42 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTFDC1Q9BY42 FKBP4P8-201ENST00000610931 1369 ntBASIC17.18■□□□□ 0.34
RTFDC1Q9BY42 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTFDC1Q9BY42 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RTFDC1Q9BY42 ATP5A1-201ENST00000282050 1945 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RTFDC1Q9BY42 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC17.18■□□□□ 0.34
RTFDC1Q9BY42 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RTFDC1Q9BY42 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RTFDC1Q9BY42 HNRNPA1P58-201ENST00000403629 610 ntBASIC17.18■□□□□ 0.34
RTFDC1Q9BY42 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC17.18■□□□□ 0.34
RTFDC1Q9BY42 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC17.18■□□□□ 0.34
RTFDC1Q9BY42 HNRNPA1P56-201ENST00000505767 954 ntBASIC17.18■□□□□ 0.34
RTFDC1Q9BY42 CASP3-205ENST00000517513 964 ntTSL 5 BASIC17.18■□□□□ 0.34
RTFDC1Q9BY42 AC023968.2-201ENST00000560593 1049 ntBASIC17.18■□□□□ 0.34
RTFDC1Q9BY42 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC17.18■□□□□ 0.34
RTFDC1Q9BY42 NAV1-210ENST00000593583 726 ntBASIC17.18■□□□□ 0.34
RTFDC1Q9BY42 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC17.18■□□□□ 0.34
RTFDC1Q9BY42 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTFDC1Q9BY42 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
RTFDC1Q9BY42 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTFDC1Q9BY42 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTFDC1Q9BY42 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RTFDC1Q9BY42 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RTFDC1Q9BY42 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTFDC1Q9BY42 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RTFDC1Q9BY42 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC17.18■□□□□ 0.34
RTFDC1Q9BY42 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RTFDC1Q9BY42 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTFDC1Q9BY42 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTFDC1Q9BY42 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTFDC1Q9BY42 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC17.17■□□□□ 0.34
RTFDC1Q9BY42 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC17.17■□□□□ 0.34
RTFDC1Q9BY42 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
RTFDC1Q9BY42 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC17.17■□□□□ 0.34
RTFDC1Q9BY42 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTFDC1Q9BY42 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RTFDC1Q9BY42 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTFDC1Q9BY42 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
RTFDC1Q9BY42 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTFDC1Q9BY42 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.17■□□□□ 0.34
RTFDC1Q9BY42 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC17.17■□□□□ 0.34
RTFDC1Q9BY42 LINP1-201ENST00000417112 917 ntTSL 2 BASIC17.17■□□□□ 0.34
RTFDC1Q9BY42 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC17.17■□□□□ 0.34
RTFDC1Q9BY42 AP000244.1-201ENST00000424582 201 ntBASIC17.17■□□□□ 0.34
RTFDC1Q9BY42 AL512599.1-201ENST00000430724 685 ntBASIC17.17■□□□□ 0.34
RTFDC1Q9BY42 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC17.17■□□□□ 0.34
RTFDC1Q9BY42 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC17.17■□□□□ 0.34
RTFDC1Q9BY42 RPL3P5-201ENST00000441645 1232 ntBASIC17.17■□□□□ 0.34
RTFDC1Q9BY42 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC17.17■□□□□ 0.34
RTFDC1Q9BY42 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC17.17■□□□□ 0.34
RTFDC1Q9BY42 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC17.17■□□□□ 0.34
RTFDC1Q9BY42 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC17.17■□□□□ 0.34
RTFDC1Q9BY42 KNOP1P1-201ENST00000542108 989 ntBASIC17.17■□□□□ 0.34
RTFDC1Q9BY42 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
RTFDC1Q9BY42 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC17.17■□□□□ 0.34
RTFDC1Q9BY42 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC17.17■□□□□ 0.34
RTFDC1Q9BY42 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC17.17■□□□□ 0.34
RTFDC1Q9BY42 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTFDC1Q9BY42 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTFDC1Q9BY42 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RTFDC1Q9BY42 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTFDC1Q9BY42 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 DUT-208ENST00000559540 1441 ntTSL 2 BASIC17.16■□□□□ 0.34
RTFDC1Q9BY42 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms