Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
TMEM54Q969K7 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM54Q969K7 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM54Q969K7 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
TMEM54Q969K7 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM54Q969K7 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM54Q969K7 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
TMEM54Q969K7 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM54Q969K7 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM54Q969K7 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC12.65□□□□□ -0.38
TMEM54Q969K7 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM54Q969K7 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
TMEM54Q969K7 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC12.65□□□□□ -0.38
TMEM54Q969K7 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM54Q969K7 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.65□□□□□ -0.38
TMEM54Q969K7 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM54Q969K7 RCC2P8-201ENST00000502779 1035 ntBASIC12.65□□□□□ -0.38
TMEM54Q969K7 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC12.65□□□□□ -0.38
TMEM54Q969K7 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC12.65□□□□□ -0.38
TMEM54Q969K7 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC12.65□□□□□ -0.38
TMEM54Q969K7 MIR3188-201ENST00000583494 85 ntBASIC12.65□□□□□ -0.38
TMEM54Q969K7 AL451050.2-201ENST00000606967 682 ntBASIC12.65□□□□□ -0.38
TMEM54Q969K7 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC12.65□□□□□ -0.38
TMEM54Q969K7 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM54Q969K7 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
TMEM54Q969K7 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.65□□□□□ -0.38
TMEM54Q969K7 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.65□□□□□ -0.38
TMEM54Q969K7 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM54Q969K7 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
TMEM54Q969K7 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM54Q969K7 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM54Q969K7 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM54Q969K7 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM54Q969K7 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM54Q969K7 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
TMEM54Q969K7 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM54Q969K7 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
TMEM54Q969K7 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM54Q969K7 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM54Q969K7 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM54Q969K7 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.65□□□□□ -0.38
TMEM54Q969K7 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM54Q969K7 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM54Q969K7 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TMEM54Q969K7 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
TMEM54Q969K7 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.39
TMEM54Q969K7 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM54Q969K7 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.64□□□□□ -0.39
TMEM54Q969K7 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
TMEM54Q969K7 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM54Q969K7 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM54Q969K7 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.64□□□□□ -0.39
TMEM54Q969K7 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM54Q969K7 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM54Q969K7 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM54Q969K7 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
TMEM54Q969K7 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM54Q969K7 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM54Q969K7 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM54Q969K7 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM54Q969K7 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM54Q969K7 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM54Q969K7 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM54Q969K7 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM54Q969K7 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC12.64□□□□□ -0.39
TMEM54Q969K7 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
TMEM54Q969K7 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM54Q969K7 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
TMEM54Q969K7 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC12.64□□□□□ -0.39
TMEM54Q969K7 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.64□□□□□ -0.39
TMEM54Q969K7 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
TMEM54Q969K7 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM54Q969K7 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.64□□□□□ -0.39
TMEM54Q969K7 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM54Q969K7 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC12.64□□□□□ -0.39
TMEM54Q969K7 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM54Q969K7 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM54Q969K7 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
TMEM54Q969K7 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM54Q969K7 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC12.64□□□□□ -0.39
TMEM54Q969K7 AK2P2-201ENST00000439142 405 ntBASIC12.64□□□□□ -0.39
TMEM54Q969K7 AC006033.1-201ENST00000440505 426 ntBASIC12.64□□□□□ -0.39
TMEM54Q969K7 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC12.64□□□□□ -0.39
TMEM54Q969K7 AC125604.1-201ENST00000496255 707 ntBASIC12.64□□□□□ -0.39
TMEM54Q969K7 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC12.64□□□□□ -0.39
TMEM54Q969K7 SKA2-205ENST00000580541 689 ntTSL 3 BASIC12.64□□□□□ -0.39
TMEM54Q969K7 MIR3615-201ENST00000581999 87 ntBASIC12.64□□□□□ -0.39
TMEM54Q969K7 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM54Q969K7 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC12.64□□□□□ -0.39
TMEM54Q969K7 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC12.64□□□□□ -0.39
TMEM54Q969K7 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC12.64□□□□□ -0.39
TMEM54Q969K7 AGAP10P-201ENST00000454844 2418 ntBASIC12.64□□□□□ -0.39
TMEM54Q969K7 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM54Q969K7 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM54Q969K7 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM54Q969K7 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.64□□□□□ -0.39
TMEM54Q969K7 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM54Q969K7 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.64□□□□□ -0.39
TMEM54Q969K7 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TMEM54Q969K7 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms