Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 HLA-J-203ENST00000494367 1087 ntBASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 SPDYE18-201ENST00000510091 1050 ntBASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 AC120045.2-201ENST00000567334 178 ntBASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 CR392039.2-201ENST00000623182 509 ntBASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 BTBD7P1-201ENST00000447253 1453 ntBASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CKAP2Q8WWK9 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 AGER-206ENST00000375070 1463 ntTSL 5 BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CKAP2Q8WWK9 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
CKAP2Q8WWK9 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC14.33□□□□□ -0.11
CKAP2Q8WWK9 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
CKAP2Q8WWK9 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
CKAP2Q8WWK9 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CKAP2Q8WWK9 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
CKAP2Q8WWK9 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CKAP2Q8WWK9 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
CKAP2Q8WWK9 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CKAP2Q8WWK9 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CKAP2Q8WWK9 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CKAP2Q8WWK9 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CKAP2Q8WWK9 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms