Protein–RNA interactions for Protein: Q8WW27

APOBEC4, Putative C->U-editing enzyme APOBEC-4, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC4Q8WW27 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
APOBEC4Q8WW27 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
APOBEC4Q8WW27 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOBEC4Q8WW27 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOBEC4Q8WW27 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
APOBEC4Q8WW27 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOBEC4Q8WW27 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOBEC4Q8WW27 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.72□□□□□ -0.21
APOBEC4Q8WW27 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
APOBEC4Q8WW27 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOBEC4Q8WW27 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
APOBEC4Q8WW27 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
APOBEC4Q8WW27 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.72□□□□□ -0.21
APOBEC4Q8WW27 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
APOBEC4Q8WW27 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOBEC4Q8WW27 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
APOBEC4Q8WW27 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
APOBEC4Q8WW27 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
APOBEC4Q8WW27 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOBEC4Q8WW27 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.71□□□□□ -0.21
APOBEC4Q8WW27 AL136172.1-201ENST00000598590 1394 ntBASIC13.71□□□□□ -0.21
APOBEC4Q8WW27 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.71□□□□□ -0.21
APOBEC4Q8WW27 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.71□□□□□ -0.21
APOBEC4Q8WW27 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOBEC4Q8WW27 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOBEC4Q8WW27 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
APOBEC4Q8WW27 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
APOBEC4Q8WW27 AC011498.7-201ENST00000624986 2027 ntBASIC13.71□□□□□ -0.21
APOBEC4Q8WW27 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOBEC4Q8WW27 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOBEC4Q8WW27 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
APOBEC4Q8WW27 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOBEC4Q8WW27 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
APOBEC4Q8WW27 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
APOBEC4Q8WW27 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC13.71□□□□□ -0.21
APOBEC4Q8WW27 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOBEC4Q8WW27 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOBEC4Q8WW27 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOBEC4Q8WW27 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOBEC4Q8WW27 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
APOBEC4Q8WW27 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOBEC4Q8WW27 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
APOBEC4Q8WW27 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.71□□□□□ -0.21
APOBEC4Q8WW27 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOBEC4Q8WW27 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOBEC4Q8WW27 AP000356.3-201ENST00000382243 753 ntBASIC13.71□□□□□ -0.21
APOBEC4Q8WW27 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOBEC4Q8WW27 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOBEC4Q8WW27 LBH-202ENST00000401506 485 ntTSL 3 BASIC13.71□□□□□ -0.21
APOBEC4Q8WW27 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC13.71□□□□□ -0.21
APOBEC4Q8WW27 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC13.71□□□□□ -0.21
APOBEC4Q8WW27 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
APOBEC4Q8WW27 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
APOBEC4Q8WW27 CFL1-206ENST00000527344 962 ntTSL 2 BASIC13.71□□□□□ -0.21
APOBEC4Q8WW27 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC13.71□□□□□ -0.21
APOBEC4Q8WW27 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.71□□□□□ -0.21
APOBEC4Q8WW27 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
APOBEC4Q8WW27 AC026803.1-201ENST00000569130 274 ntBASIC13.71□□□□□ -0.21
APOBEC4Q8WW27 NAT9-220ENST00000582870 896 ntTSL 5 BASIC13.71□□□□□ -0.21
APOBEC4Q8WW27 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
APOBEC4Q8WW27 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
APOBEC4Q8WW27 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
APOBEC4Q8WW27 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
APOBEC4Q8WW27 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
APOBEC4Q8WW27 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.71□□□□□ -0.22
APOBEC4Q8WW27 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
APOBEC4Q8WW27 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
APOBEC4Q8WW27 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOBEC4Q8WW27 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOBEC4Q8WW27 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOBEC4Q8WW27 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
APOBEC4Q8WW27 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
APOBEC4Q8WW27 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.7□□□□□ -0.22
APOBEC4Q8WW27 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOBEC4Q8WW27 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.7□□□□□ -0.22
APOBEC4Q8WW27 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
APOBEC4Q8WW27 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOBEC4Q8WW27 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
APOBEC4Q8WW27 NCR3-202ENST00000376071 541 ntTSL 5 BASIC13.7□□□□□ -0.22
APOBEC4Q8WW27 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC13.7□□□□□ -0.22
APOBEC4Q8WW27 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOBEC4Q8WW27 RPL8P2-201ENST00000430538 502 ntBASIC13.7□□□□□ -0.22
APOBEC4Q8WW27 AL035414.1-201ENST00000451327 857 ntBASIC13.7□□□□□ -0.22
APOBEC4Q8WW27 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.7□□□□□ -0.22
APOBEC4Q8WW27 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.7□□□□□ -0.22
APOBEC4Q8WW27 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC13.7□□□□□ -0.22
APOBEC4Q8WW27 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC13.7□□□□□ -0.22
APOBEC4Q8WW27 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC13.7□□□□□ -0.22
APOBEC4Q8WW27 LINC01783-202ENST00000614408 828 ntBASIC13.7□□□□□ -0.22
APOBEC4Q8WW27 WT1-AS_6.1-201ENST00000614919 121 ntBASIC13.7□□□□□ -0.22
APOBEC4Q8WW27 BX284668.2-205ENST00000619677 828 ntBASIC13.7□□□□□ -0.22
APOBEC4Q8WW27 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
APOBEC4Q8WW27 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOBEC4Q8WW27 AC027601.3-201ENST00000622907 509 ntBASIC13.7□□□□□ -0.22
APOBEC4Q8WW27 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
APOBEC4Q8WW27 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOBEC4Q8WW27 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
APOBEC4Q8WW27 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.7□□□□□ -0.22
APOBEC4Q8WW27 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
APOBEC4Q8WW27 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms