Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SMARCC2Q8TAQ2 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 CETP-203ENST00000566128 1733 ntTSL 5 BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 LSS-211ENST00000522411 2523 ntTSL 2 BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 AC005324.6-201ENST00000587972 613 ntBASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 PCBP2-OT1-201ENST00000634357 590 ntBASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC16.85■□□□□ 0.29
SMARCC2Q8TAQ2 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 AC105206.1-202ENST00000314927 2368 ntBASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 DPM3-202ENST00000368399 517 ntBASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 FNTAP2-201ENST00000430308 634 ntBASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 AKR7A2P1-201ENST00000460134 915 ntBASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 RPL18P13-201ENST00000478088 569 ntBASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 SCARNA20.5-201ENST00000516991 142 ntBASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 AC005962.1-201ENST00000584100 773 ntBASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 AC138649.2-201ENST00000615886 705 ntBASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 AC138028.6-201ENST00000616106 1482 ntBASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC16.84■□□□□ 0.29
SMARCC2Q8TAQ2 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms