Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ARHGEF39Q8N4T4 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC13.52□□□□□ -0.25
ARHGEF39Q8N4T4 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC13.52□□□□□ -0.25
ARHGEF39Q8N4T4 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC13.52□□□□□ -0.25
ARHGEF39Q8N4T4 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC13.52□□□□□ -0.25
ARHGEF39Q8N4T4 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC13.52□□□□□ -0.25
ARHGEF39Q8N4T4 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC13.52□□□□□ -0.25
ARHGEF39Q8N4T4 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ARHGEF39Q8N4T4 AC114947.1-202ENST00000514136 344 ntBASIC13.52□□□□□ -0.25
ARHGEF39Q8N4T4 RNA5SP423-201ENST00000517127 109 ntBASIC13.52□□□□□ -0.25
ARHGEF39Q8N4T4 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC13.52□□□□□ -0.25
ARHGEF39Q8N4T4 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ARHGEF39Q8N4T4 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC13.52□□□□□ -0.25
ARHGEF39Q8N4T4 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC13.52□□□□□ -0.25
ARHGEF39Q8N4T4 NAT9-220ENST00000582870 896 ntTSL 5 BASIC13.52□□□□□ -0.25
ARHGEF39Q8N4T4 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC13.52□□□□□ -0.25
ARHGEF39Q8N4T4 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.52□□□□□ -0.25
ARHGEF39Q8N4T4 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
ARHGEF39Q8N4T4 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ARHGEF39Q8N4T4 RPL13AP3-202ENST00000494676 1473 ntBASIC13.52□□□□□ -0.25
ARHGEF39Q8N4T4 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ARHGEF39Q8N4T4 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ARHGEF39Q8N4T4 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.25
ARHGEF39Q8N4T4 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ARHGEF39Q8N4T4 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ARHGEF39Q8N4T4 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
ARHGEF39Q8N4T4 AC090643.2-201ENST00000623442 2029 ntBASIC13.52□□□□□ -0.25
ARHGEF39Q8N4T4 AC067931.2-201ENST00000623655 2003 ntBASIC13.52□□□□□ -0.25
ARHGEF39Q8N4T4 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ARHGEF39Q8N4T4 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ARHGEF39Q8N4T4 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ARHGEF39Q8N4T4 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.52□□□□□ -0.25
ARHGEF39Q8N4T4 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
ARHGEF39Q8N4T4 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ARHGEF39Q8N4T4 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 AMT-256ENST00000638063 1783 ntTSL 5 BASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 BAX-205ENST00000391871 687 ntTSL 5 BASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 DUTP3-201ENST00000450025 415 ntBASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 AC234782.1-201ENST00000451950 919 ntBASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 NDUFS6P1-201ENST00000485187 316 ntBASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 AC008723.1-201ENST00000506922 207 ntBASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 MIR3907-201ENST00000579424 151 ntBASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 AC079416.2-201ENST00000625035 1193 ntBASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 CMC2-224ENST00000630396 481 ntTSL 5 BASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 AC026748.1-201ENST00000624349 3251 ntBASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.51□□□□□ -0.25
ARHGEF39Q8N4T4 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC13.5□□□□□ -0.25
ARHGEF39Q8N4T4 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms