Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 MXI1-205ENST00000393134 889 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 HIST2H2BB-201ENST00000449108 381 ntBASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 PFN2-215ENST00000497148 743 ntTSL 4 BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 AP006547.1-201ENST00000563435 692 ntBASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 RHOXF1P1-202ENST00000635473 501 ntBASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 AC105233.6-201ENST00000642093 218 ntBASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 SHC1P1-201ENST00000425230 1745 ntBASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.82□□□□□ -0.36
LINC00346Q8IVM7 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 FAM90A12P-201ENST00000519497 2375 ntBASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 FAM90A24P-201ENST00000520792 2369 ntBASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 E2F3P2-201ENST00000447755 1422 ntBASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 PGF-202ENST00000405431 666 ntTSL 5 BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 HIST1H2BPS3-201ENST00000419683 341 ntBASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 GSAP-205ENST00000430584 600 ntTSL 5 BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 CNN2P10-201ENST00000443067 918 ntBASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 AL355994.2-201ENST00000447882 704 ntBASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 C2orf69P2-201ENST00000562032 1123 ntBASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 AC092053.3-201ENST00000641308 4975 ntBASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LINC00346Q8IVM7 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms