Protein–RNA interactions for Protein: Q717R9

CYS1, Cystin-1, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYS1Q717R9 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
CYS1Q717R9 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CYS1Q717R9 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CYS1Q717R9 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CYS1Q717R9 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CYS1Q717R9 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CYS1Q717R9 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CYS1Q717R9 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CYS1Q717R9 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CYS1Q717R9 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.33□□□□□ -0.12
CYS1Q717R9 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CYS1Q717R9 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CYS1Q717R9 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.33□□□□□ -0.12
CYS1Q717R9 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.33□□□□□ -0.12
CYS1Q717R9 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.33□□□□□ -0.12
CYS1Q717R9 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.33□□□□□ -0.12
CYS1Q717R9 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CYS1Q717R9 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.33□□□□□ -0.12
CYS1Q717R9 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC14.33□□□□□ -0.12
CYS1Q717R9 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.33□□□□□ -0.12
CYS1Q717R9 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CYS1Q717R9 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.33□□□□□ -0.12
CYS1Q717R9 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.33□□□□□ -0.12
CYS1Q717R9 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CYS1Q717R9 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.33□□□□□ -0.12
CYS1Q717R9 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CYS1Q717R9 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CYS1Q717R9 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CYS1Q717R9 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CYS1Q717R9 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CYS1Q717R9 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CYS1Q717R9 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.33□□□□□ -0.12
CYS1Q717R9 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
CYS1Q717R9 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.33□□□□□ -0.12
CYS1Q717R9 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CYS1Q717R9 LINC01165-201ENST00000445190 1623 ntBASIC14.33□□□□□ -0.12
CYS1Q717R9 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC14.33□□□□□ -0.12
CYS1Q717R9 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CYS1Q717R9 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC14.33□□□□□ -0.12
CYS1Q717R9 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC14.33□□□□□ -0.12
CYS1Q717R9 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
CYS1Q717R9 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CYS1Q717R9 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CYS1Q717R9 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CYS1Q717R9 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CYS1Q717R9 CU639417.3-201ENST00000624240 1404 ntBASIC14.32□□□□□ -0.12
CYS1Q717R9 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC14.32□□□□□ -0.12
CYS1Q717R9 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CYS1Q717R9 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
CYS1Q717R9 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
CYS1Q717R9 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.32□□□□□ -0.12
CYS1Q717R9 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CYS1Q717R9 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC14.32□□□□□ -0.12
CYS1Q717R9 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
CYS1Q717R9 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.32□□□□□ -0.12
CYS1Q717R9 SBF1P1-201ENST00000444527 5631 ntBASIC14.32□□□□□ -0.12
CYS1Q717R9 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CYS1Q717R9 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC14.32□□□□□ -0.12
CYS1Q717R9 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CYS1Q717R9 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CYS1Q717R9 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CYS1Q717R9 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.32□□□□□ -0.12
CYS1Q717R9 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.32□□□□□ -0.12
CYS1Q717R9 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CYS1Q717R9 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CYS1Q717R9 KRT43P-201ENST00000434019 910 ntBASIC14.32□□□□□ -0.12
CYS1Q717R9 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.32□□□□□ -0.12
CYS1Q717R9 KLF2P1-201ENST00000447438 1042 ntBASIC14.32□□□□□ -0.12
CYS1Q717R9 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.32□□□□□ -0.12
CYS1Q717R9 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.32□□□□□ -0.12
CYS1Q717R9 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.32□□□□□ -0.12
CYS1Q717R9 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CYS1Q717R9 PGAM1P5-201ENST00000548011 764 ntBASIC14.32□□□□□ -0.12
CYS1Q717R9 AC079316.1-201ENST00000548397 411 ntBASIC14.32□□□□□ -0.12
CYS1Q717R9 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.32□□□□□ -0.12
CYS1Q717R9 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.32□□□□□ -0.12
CYS1Q717R9 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CYS1Q717R9 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.32□□□□□ -0.12
CYS1Q717R9 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
CYS1Q717R9 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CYS1Q717R9 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.32□□□□□ -0.12
CYS1Q717R9 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CYS1Q717R9 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC14.32□□□□□ -0.12
CYS1Q717R9 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC14.32□□□□□ -0.12
CYS1Q717R9 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CYS1Q717R9 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CYS1Q717R9 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CYS1Q717R9 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CYS1Q717R9 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CYS1Q717R9 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CYS1Q717R9 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CYS1Q717R9 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
CYS1Q717R9 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CYS1Q717R9 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CYS1Q717R9 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CYS1Q717R9 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.31□□□□□ -0.12
CYS1Q717R9 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CYS1Q717R9 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.31□□□□□ -0.12
CYS1Q717R9 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC14.31□□□□□ -0.12
CYS1Q717R9 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms