Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HIST2H2BCQ6DN03 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HIST2H2BCQ6DN03 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HIST2H2BCQ6DN03 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.13□□□□□ -0.47
HIST2H2BCQ6DN03 AC046158.3-201ENST00000624947 2558 ntBASIC12.13□□□□□ -0.47
HIST2H2BCQ6DN03 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
HIST2H2BCQ6DN03 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HIST2H2BCQ6DN03 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HIST2H2BCQ6DN03 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 AC139712.1-201ENST00000378256 1875 ntBASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 AC105250.1-201ENST00000509378 2057 ntBASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 AC024909.3-201ENST00000611513 2257 ntBASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 PCP2-201ENST00000311069 776 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 SPTLC1P3-201ENST00000403408 259 ntBASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 TPT1P9-201ENST00000413759 514 ntBASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 AL512328.1-203ENST00000428480 673 ntTSL 5 BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 AL355500.1-201ENST00000439421 297 ntTSL 3 BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 GYG1-209ENST00000483267 801 ntTSL 2 BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 AL592146.2-201ENST00000565388 444 ntTSL 5 BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 PCTP-206ENST00000573500 919 ntTSL 3 BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 MIR5193-201ENST00000584510 109 ntBASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 AC113385.2-201ENST00000614465 762 ntBASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 AC097474.1-201ENST00000506481 1371 ntBASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
HIST2H2BCQ6DN03 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.11□□□□□ -0.47
HIST2H2BCQ6DN03 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC12.11□□□□□ -0.47
HIST2H2BCQ6DN03 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST2H2BCQ6DN03 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST2H2BCQ6DN03 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.11□□□□□ -0.47
HIST2H2BCQ6DN03 AC092135.3-201ENST00000624151 1846 ntBASIC12.11□□□□□ -0.47
HIST2H2BCQ6DN03 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HIST2H2BCQ6DN03 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST2H2BCQ6DN03 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
HIST2H2BCQ6DN03 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST2H2BCQ6DN03 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HIST2H2BCQ6DN03 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HIST2H2BCQ6DN03 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST2H2BCQ6DN03 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST2H2BCQ6DN03 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC12.11□□□□□ -0.47
HIST2H2BCQ6DN03 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST2H2BCQ6DN03 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HIST2H2BCQ6DN03 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST2H2BCQ6DN03 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
HIST2H2BCQ6DN03 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HIST2H2BCQ6DN03 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST2H2BCQ6DN03 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HIST2H2BCQ6DN03 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST2H2BCQ6DN03 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC12.11□□□□□ -0.47
HIST2H2BCQ6DN03 CCL24-201ENST00000222902 582 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST2H2BCQ6DN03 WFDC3-201ENST00000243938 1000 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST2H2BCQ6DN03 FAM86FP-201ENST00000338711 969 ntBASIC12.11□□□□□ -0.47
HIST2H2BCQ6DN03 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HIST2H2BCQ6DN03 HMGCLL1-203ENST00000370850 1171 ntTSL 2 BASIC12.11□□□□□ -0.47
HIST2H2BCQ6DN03 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms