Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CERKLQ49MI3 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CERKLQ49MI3 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CERKLQ49MI3 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CERKLQ49MI3 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC16.73■□□□□ 0.27
CERKLQ49MI3 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CERKLQ49MI3 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
CERKLQ49MI3 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CERKLQ49MI3 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CERKLQ49MI3 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CERKLQ49MI3 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CERKLQ49MI3 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CERKLQ49MI3 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC16.73■□□□□ 0.27
CERKLQ49MI3 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CERKLQ49MI3 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CERKLQ49MI3 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CERKLQ49MI3 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CERKLQ49MI3 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CERKLQ49MI3 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.73■□□□□ 0.27
CERKLQ49MI3 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CERKLQ49MI3 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
CERKLQ49MI3 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CERKLQ49MI3 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CERKLQ49MI3 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CERKLQ49MI3 PYY2-201ENST00000315776 282 ntBASIC16.73■□□□□ 0.27
CERKLQ49MI3 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CERKLQ49MI3 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CERKLQ49MI3 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CERKLQ49MI3 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CERKLQ49MI3 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CERKLQ49MI3 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC16.73■□□□□ 0.27
CERKLQ49MI3 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CERKLQ49MI3 AC012362.1-201ENST00000434906 739 ntBASIC16.73■□□□□ 0.27
CERKLQ49MI3 LYPLA2P1-203ENST00000447689 696 ntBASIC16.73■□□□□ 0.27
CERKLQ49MI3 SCARNA12-201ENST00000459155 270 ntBASIC16.73■□□□□ 0.27
CERKLQ49MI3 AC095040.1-201ENST00000513286 675 ntBASIC16.73■□□□□ 0.27
CERKLQ49MI3 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC16.73■□□□□ 0.27
CERKLQ49MI3 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CERKLQ49MI3 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC16.73■□□□□ 0.27
CERKLQ49MI3 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC16.73■□□□□ 0.27
CERKLQ49MI3 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC16.73■□□□□ 0.27
CERKLQ49MI3 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC16.73■□□□□ 0.27
CERKLQ49MI3 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CERKLQ49MI3 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CERKLQ49MI3 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
CERKLQ49MI3 AL022313.4-201ENST00000562756 2046 ntBASIC16.73■□□□□ 0.27
CERKLQ49MI3 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CERKLQ49MI3 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
CERKLQ49MI3 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
CERKLQ49MI3 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
CERKLQ49MI3 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CERKLQ49MI3 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
CERKLQ49MI3 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC16.73■□□□□ 0.27
CERKLQ49MI3 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CERKLQ49MI3 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC16.72■□□□□ 0.27
CERKLQ49MI3 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CERKLQ49MI3 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CERKLQ49MI3 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CERKLQ49MI3 AC015656.1-201ENST00000624209 3578 ntBASIC16.72■□□□□ 0.27
CERKLQ49MI3 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CERKLQ49MI3 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CERKLQ49MI3 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CERKLQ49MI3 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CERKLQ49MI3 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.72■□□□□ 0.27
CERKLQ49MI3 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CERKLQ49MI3 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CERKLQ49MI3 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CERKLQ49MI3 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CERKLQ49MI3 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CERKLQ49MI3 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CERKLQ49MI3 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC16.72■□□□□ 0.27
CERKLQ49MI3 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
CERKLQ49MI3 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC16.72■□□□□ 0.27
CERKLQ49MI3 RN7SKP109-201ENST00000410592 316 ntBASIC16.72■□□□□ 0.27
CERKLQ49MI3 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC16.72■□□□□ 0.27
CERKLQ49MI3 DPY19L2P5-201ENST00000456300 331 ntBASIC16.72■□□□□ 0.27
CERKLQ49MI3 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC16.72■□□□□ 0.27
CERKLQ49MI3 CHCHD2P2-201ENST00000503744 321 ntBASIC16.72■□□□□ 0.27
CERKLQ49MI3 IGHV3-37-201ENST00000518544 340 ntBASIC16.72■□□□□ 0.27
CERKLQ49MI3 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CERKLQ49MI3 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CERKLQ49MI3 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC16.72■□□□□ 0.27
CERKLQ49MI3 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC16.72■□□□□ 0.27
CERKLQ49MI3 AC007952.4-201ENST00000573866 637 ntBASIC16.72■□□□□ 0.27
CERKLQ49MI3 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CERKLQ49MI3 AC007250.1-201ENST00000608934 338 ntBASIC16.72■□□□□ 0.27
CERKLQ49MI3 AC007686.3-201ENST00000619017 3487 ntBASIC16.72■□□□□ 0.27
CERKLQ49MI3 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CERKLQ49MI3 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CERKLQ49MI3 AC090502.4-201ENST00000551714 1386 ntBASIC16.72■□□□□ 0.27
CERKLQ49MI3 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CERKLQ49MI3 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CERKLQ49MI3 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC16.72■□□□□ 0.27
CERKLQ49MI3 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CERKLQ49MI3 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CERKLQ49MI3 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CERKLQ49MI3 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CERKLQ49MI3 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.71■□□□□ 0.27
CERKLQ49MI3 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CERKLQ49MI3 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms