Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
RFX7Q2KHR2 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
RFX7Q2KHR2 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
RFX7Q2KHR2 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC17.24■□□□□ 0.35
RFX7Q2KHR2 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
RFX7Q2KHR2 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFX7Q2KHR2 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFX7Q2KHR2 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFX7Q2KHR2 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFX7Q2KHR2 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFX7Q2KHR2 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFX7Q2KHR2 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
RFX7Q2KHR2 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFX7Q2KHR2 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFX7Q2KHR2 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFX7Q2KHR2 KRT18P9-201ENST00000604826 1300 ntBASIC17.24■□□□□ 0.35
RFX7Q2KHR2 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFX7Q2KHR2 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFX7Q2KHR2 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFX7Q2KHR2 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFX7Q2KHR2 PFN2-202ENST00000423691 911 ntTSL 2 BASIC17.24■□□□□ 0.35
RFX7Q2KHR2 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
RFX7Q2KHR2 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC17.24■□□□□ 0.35
RFX7Q2KHR2 RPL18AP3-201ENST00000462885 528 ntBASIC17.24■□□□□ 0.35
RFX7Q2KHR2 ORAOV1P1-201ENST00000503108 395 ntBASIC17.24■□□□□ 0.35
RFX7Q2KHR2 AC114947.1-202ENST00000514136 344 ntBASIC17.24■□□□□ 0.35
RFX7Q2KHR2 DNM1P30-201ENST00000563586 452 ntBASIC17.24■□□□□ 0.35
RFX7Q2KHR2 SKA2-205ENST00000580541 689 ntTSL 3 BASIC17.24■□□□□ 0.35
RFX7Q2KHR2 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC17.24■□□□□ 0.35
RFX7Q2KHR2 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC17.24■□□□□ 0.35
RFX7Q2KHR2 NID2-208ENST00000617139 3827 ntTSL 5 BASIC17.24■□□□□ 0.35
RFX7Q2KHR2 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
RFX7Q2KHR2 AC025262.2-201ENST00000623975 1056 ntBASIC17.24■□□□□ 0.35
RFX7Q2KHR2 AC009145.4-201ENST00000625119 1294 ntBASIC17.24■□□□□ 0.35
RFX7Q2KHR2 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFX7Q2KHR2 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFX7Q2KHR2 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
RFX7Q2KHR2 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RFX7Q2KHR2 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RFX7Q2KHR2 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC17.23■□□□□ 0.35
RFX7Q2KHR2 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX7Q2KHR2 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX7Q2KHR2 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX7Q2KHR2 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX7Q2KHR2 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX7Q2KHR2 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RFX7Q2KHR2 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC17.23■□□□□ 0.35
RFX7Q2KHR2 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX7Q2KHR2 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX7Q2KHR2 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX7Q2KHR2 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC17.23■□□□□ 0.35
RFX7Q2KHR2 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RFX7Q2KHR2 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RFX7Q2KHR2 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RFX7Q2KHR2 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
RFX7Q2KHR2 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RFX7Q2KHR2 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RFX7Q2KHR2 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RFX7Q2KHR2 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RFX7Q2KHR2 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RFX7Q2KHR2 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RFX7Q2KHR2 AL031713.1-201ENST00000564813 661 ntBASIC17.23■□□□□ 0.35
RFX7Q2KHR2 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RFX7Q2KHR2 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC17.23■□□□□ 0.35
RFX7Q2KHR2 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RFX7Q2KHR2 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC17.23■□□□□ 0.35
RFX7Q2KHR2 AC023794.5-201ENST00000564380 2157 ntBASIC17.23■□□□□ 0.35
RFX7Q2KHR2 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RFX7Q2KHR2 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC17.22■□□□□ 0.35
RFX7Q2KHR2 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFX7Q2KHR2 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RFX7Q2KHR2 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFX7Q2KHR2 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFX7Q2KHR2 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFX7Q2KHR2 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFX7Q2KHR2 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFX7Q2KHR2 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFX7Q2KHR2 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RFX7Q2KHR2 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC17.22■□□□□ 0.35
RFX7Q2KHR2 AL157996.1-201ENST00000624684 2299 ntBASIC17.22■□□□□ 0.35
RFX7Q2KHR2 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFX7Q2KHR2 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
RFX7Q2KHR2 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RFX7Q2KHR2 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RFX7Q2KHR2 AL590824.1-201ENST00000403828 1349 ntBASIC17.22■□□□□ 0.35
RFX7Q2KHR2 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC17.22■□□□□ 0.35
RFX7Q2KHR2 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RFX7Q2KHR2 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
RFX7Q2KHR2 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RFX7Q2KHR2 AP000356.3-201ENST00000382243 753 ntBASIC17.22■□□□□ 0.35
RFX7Q2KHR2 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RFX7Q2KHR2 AL807761.2-201ENST00000422849 729 ntBASIC17.22■□□□□ 0.35
RFX7Q2KHR2 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC17.22■□□□□ 0.35
RFX7Q2KHR2 DUX4L50-201ENST00000455245 715 ntBASIC17.22■□□□□ 0.35
RFX7Q2KHR2 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RFX7Q2KHR2 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RFX7Q2KHR2 GOLGA2P8-201ENST00000505201 779 ntBASIC17.22■□□□□ 0.35
RFX7Q2KHR2 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC17.22■□□□□ 0.35
RFX7Q2KHR2 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC17.22■□□□□ 0.35
RFX7Q2KHR2 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms