Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 RNASEH2CP1-201ENST00000454281 502 ntBASIC12.07□□□□□ -0.48
RIPPLY3P57055 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC12.07□□□□□ -0.48
RIPPLY3P57055 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC12.07□□□□□ -0.48
RIPPLY3P57055 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC12.07□□□□□ -0.48
RIPPLY3P57055 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC12.07□□□□□ -0.48
RIPPLY3P57055 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC12.07□□□□□ -0.48
RIPPLY3P57055 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RIPPLY3P57055 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC12.07□□□□□ -0.48
RIPPLY3P57055 AC004801.1-201ENST00000549557 360 ntBASIC12.07□□□□□ -0.48
RIPPLY3P57055 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.07□□□□□ -0.48
RIPPLY3P57055 MIR4783-201ENST00000580343 82 ntBASIC12.07□□□□□ -0.48
RIPPLY3P57055 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
RIPPLY3P57055 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
RIPPLY3P57055 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC12.07□□□□□ -0.48
RIPPLY3P57055 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC12.07□□□□□ -0.48
RIPPLY3P57055 PAX8-AS1-219ENST00000623306 840 ntTSL 5 BASIC12.07□□□□□ -0.48
RIPPLY3P57055 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC12.07□□□□□ -0.48
RIPPLY3P57055 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.07□□□□□ -0.48
RIPPLY3P57055 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
RIPPLY3P57055 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RIPPLY3P57055 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RIPPLY3P57055 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RIPPLY3P57055 LINC01165-201ENST00000445190 1623 ntBASIC12.07□□□□□ -0.48
RIPPLY3P57055 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
RIPPLY3P57055 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC12.07□□□□□ -0.48
RIPPLY3P57055 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
RIPPLY3P57055 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RIPPLY3P57055 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
RIPPLY3P57055 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC12.07□□□□□ -0.48
RIPPLY3P57055 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC12.07□□□□□ -0.48
RIPPLY3P57055 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.07□□□□□ -0.48
RIPPLY3P57055 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
RIPPLY3P57055 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC12.06□□□□□ -0.48
RIPPLY3P57055 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
RIPPLY3P57055 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
RIPPLY3P57055 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
RIPPLY3P57055 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RIPPLY3P57055 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RIPPLY3P57055 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RIPPLY3P57055 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RIPPLY3P57055 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC12.06□□□□□ -0.48
RIPPLY3P57055 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC12.06□□□□□ -0.48
RIPPLY3P57055 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RIPPLY3P57055 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
RIPPLY3P57055 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.06□□□□□ -0.48
RIPPLY3P57055 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.06□□□□□ -0.48
RIPPLY3P57055 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RIPPLY3P57055 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RIPPLY3P57055 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
RIPPLY3P57055 LCE4A-201ENST00000335535 388 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
RIPPLY3P57055 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RIPPLY3P57055 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RIPPLY3P57055 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC12.06□□□□□ -0.48
RIPPLY3P57055 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RIPPLY3P57055 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
RIPPLY3P57055 THAP4-203ENST00000402545 833 ntTSL 5 BASIC12.06□□□□□ -0.48
RIPPLY3P57055 AL139094.1-201ENST00000405549 1188 ntBASIC12.06□□□□□ -0.48
RIPPLY3P57055 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC12.06□□□□□ -0.48
RIPPLY3P57055 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
RIPPLY3P57055 RPL18AP15-201ENST00000430258 517 ntBASIC12.06□□□□□ -0.48
RIPPLY3P57055 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.06□□□□□ -0.48
RIPPLY3P57055 AC009517.1-201ENST00000454750 570 ntBASIC12.06□□□□□ -0.48
RIPPLY3P57055 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.06□□□□□ -0.48
RIPPLY3P57055 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC12.06□□□□□ -0.48
RIPPLY3P57055 ISL1-203ENST00000511384 981 ntTSL 5 BASIC12.06□□□□□ -0.48
RIPPLY3P57055 KRT127P-201ENST00000547183 433 ntBASIC12.06□□□□□ -0.48
RIPPLY3P57055 HERC2P11-201ENST00000562845 725 ntBASIC12.06□□□□□ -0.48
RIPPLY3P57055 TPST2P1-201ENST00000564073 1102 ntBASIC12.06□□□□□ -0.48
RIPPLY3P57055 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC12.06□□□□□ -0.48
RIPPLY3P57055 AC100756.2-201ENST00000569537 736 ntBASIC12.06□□□□□ -0.48
RIPPLY3P57055 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.06□□□□□ -0.48
RIPPLY3P57055 LINC01029-202ENST00000578833 366 ntTSL 3 BASIC12.06□□□□□ -0.48
RIPPLY3P57055 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC12.06□□□□□ -0.48
RIPPLY3P57055 AL157813.1-201ENST00000612996 587 ntBASIC12.06□□□□□ -0.48
RIPPLY3P57055 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC12.06□□□□□ -0.48
RIPPLY3P57055 Z82244.2-201ENST00000632196 448 ntBASIC12.06□□□□□ -0.48
RIPPLY3P57055 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC12.06□□□□□ -0.48
RIPPLY3P57055 OR2I1P-209ENST00000641730 5365 ntBASIC12.06□□□□□ -0.48
RIPPLY3P57055 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
RIPPLY3P57055 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
RIPPLY3P57055 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RIPPLY3P57055 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC12.06□□□□□ -0.48
RIPPLY3P57055 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RIPPLY3P57055 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RIPPLY3P57055 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
RIPPLY3P57055 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RIPPLY3P57055 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
RIPPLY3P57055 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC12.06□□□□□ -0.48
RIPPLY3P57055 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
RIPPLY3P57055 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC12.06□□□□□ -0.48
RIPPLY3P57055 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RIPPLY3P57055 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
RIPPLY3P57055 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
RIPPLY3P57055 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RIPPLY3P57055 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
RIPPLY3P57055 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC12.06□□□□□ -0.48
RIPPLY3P57055 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
RIPPLY3P57055 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC12.06□□□□□ -0.48
RIPPLY3P57055 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
RIPPLY3P57055 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms