Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CMC4P56277 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC10.75□□□□□ -0.69
CMC4P56277 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CMC4P56277 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
CMC4P56277 KRT8P21-201ENST00000430398 1491 ntBASIC10.74□□□□□ -0.69
CMC4P56277 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CMC4P56277 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
CMC4P56277 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC10.74□□□□□ -0.69
CMC4P56277 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CMC4P56277 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CMC4P56277 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CMC4P56277 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
CMC4P56277 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC10.74□□□□□ -0.69
CMC4P56277 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
CMC4P56277 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CMC4P56277 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC10.74□□□□□ -0.69
CMC4P56277 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
CMC4P56277 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC10.74□□□□□ -0.69
CMC4P56277 CYP4F23P-201ENST00000593402 1579 ntBASIC10.74□□□□□ -0.69
CMC4P56277 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC10.74□□□□□ -0.69
CMC4P56277 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC10.74□□□□□ -0.69
CMC4P56277 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CMC4P56277 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
CMC4P56277 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CMC4P56277 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
CMC4P56277 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CMC4P56277 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CMC4P56277 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CMC4P56277 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CMC4P56277 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CMC4P56277 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CMC4P56277 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CMC4P56277 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
CMC4P56277 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CMC4P56277 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CMC4P56277 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC10.74□□□□□ -0.69
CMC4P56277 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
CMC4P56277 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
CMC4P56277 AC239868.1-201ENST00000369385 493 ntBASIC10.74□□□□□ -0.69
CMC4P56277 HNRNPA1P41-201ENST00000397777 928 ntBASIC10.74□□□□□ -0.69
CMC4P56277 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CMC4P56277 HMGA1P1-201ENST00000415560 1062 ntBASIC10.74□□□□□ -0.69
CMC4P56277 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC10.74□□□□□ -0.69
CMC4P56277 CALR4P-201ENST00000431943 946 ntBASIC10.74□□□□□ -0.69
CMC4P56277 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC10.74□□□□□ -0.69
CMC4P56277 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC10.74□□□□□ -0.69
CMC4P56277 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC10.74□□□□□ -0.69
CMC4P56277 RHEB-207ENST00000496004 744 ntTSL 2 BASIC10.74□□□□□ -0.69
CMC4P56277 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC10.74□□□□□ -0.69
CMC4P56277 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CMC4P56277 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CMC4P56277 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC10.74□□□□□ -0.69
CMC4P56277 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC10.74□□□□□ -0.69
CMC4P56277 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC10.74□□□□□ -0.69
CMC4P56277 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC10.74□□□□□ -0.69
CMC4P56277 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
CMC4P56277 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
CMC4P56277 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
CMC4P56277 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CMC4P56277 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC10.74□□□□□ -0.69
CMC4P56277 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC10.74□□□□□ -0.69
CMC4P56277 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CMC4P56277 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
CMC4P56277 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
CMC4P56277 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC10.74□□□□□ -0.69
CMC4P56277 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC10.74□□□□□ -0.69
CMC4P56277 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC10.74□□□□□ -0.69
CMC4P56277 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CMC4P56277 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CMC4P56277 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CMC4P56277 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
CMC4P56277 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC10.74□□□□□ -0.69
CMC4P56277 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC10.74□□□□□ -0.69
CMC4P56277 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
CMC4P56277 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
CMC4P56277 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CMC4P56277 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CMC4P56277 AC020910.6-201ENST00000623084 1459 ntBASIC10.74□□□□□ -0.69
CMC4P56277 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CMC4P56277 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
CMC4P56277 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
CMC4P56277 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CMC4P56277 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC10.73□□□□□ -0.69
CMC4P56277 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CMC4P56277 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
CMC4P56277 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC10.73□□□□□ -0.69
CMC4P56277 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CMC4P56277 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC10.73□□□□□ -0.69
CMC4P56277 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CMC4P56277 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CMC4P56277 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
CMC4P56277 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC10.73□□□□□ -0.69
CMC4P56277 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC10.73□□□□□ -0.69
CMC4P56277 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CMC4P56277 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CMC4P56277 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CMC4P56277 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC10.73□□□□□ -0.69
CMC4P56277 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CMC4P56277 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
CMC4P56277 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms